Detail information of GWHGAAEX001584/evm.TU.scaffold_110.6
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|325280864|ref|YP_004253406.1| | 4.00E-38 | TIR protein [Odoribacter splanchnicus DSM 220712] |
| KOG | KOG0229 | 0 | Phosphatidylinositol-4-phosphate 5-kinase |
| nr | gi|743801864|ref|XP_010926458.1| | 0 | PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 2-like [Elaeis guineensis] |
| Swissprot | tr|Q56YP2|PI5K1_ARATH | 0 | Phosphatidylinositol 4-phosphate 5-kinase 1 |
| trEMBL | tr|F6H0M1|F6H0M1_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB45518.1} |
| TAIR | AT1G21980 | 0 | phosphatidylinositol-4-phosphate 5-kinase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000110 | 277693 | 282361 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX001584
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module3 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02493.19 | MORN | 79 | 101 | 0.0001 |
| PF02493.19 | MORN | 102 | 123 | 1.90E-06 |
| PF02493.19 | MORN | 125 | 147 | 2.80E-05 |
| PF02493.19 | MORN | 148 | 169 | 0.0004 |
| PF02493.19 | MORN | 171 | 192 | 3.40E-06 |
| PF02493.19 | MORN | 194 | 216 | 2.90E-07 |
| PF02493.19 | MORN | 217 | 238 | 4.80E-07 |
| PF01504.17 | PIP5K | 465 | 747 | 3.10E-90 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0046488 | Biological Process | phosphatidylinositol metabolic process |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0016308 | Molecular Function | 1-phosphatidylinositol-4-phosphate 5-kinase activity |
| GO:0016307 | Molecular Function | phosphatidylinositol phosphate kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.770 |
| SRR2545915 | Juvenile tuber | 8.020 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 4.870 |
| SRR5643514 | five period of Gastrodia elata | 4.060 | |
| SRR5643515 | five period of Gastrodia elata | 6.240 | |
| SRR5643524 | five period of Gastrodia elata | 4.730 | |
| SRR5643525 | five period of Gastrodia elata | 3.470 | |
| SRR5643528 | five period of Gastrodia elata | 3.390 | |
| SRR5643658 | five period of Gastrodia elata | 2.930 | |
| SRR5643659 | five period of Gastrodia elata | 18.720 | |
| SRR5643660 | five period of Gastrodia elata | 15.100 | |
| SRR5643661 | five period of Gastrodia elata | 16.390 | |
| SRR5643662 | five period of Gastrodia elata | 9.250 | |
| SRR5643663 | five period of Gastrodia elata | 10.010 | |
| SRR5643664 | five period of Gastrodia elata | 12.990 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 6.660 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 4.780 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 7.300 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 5.860 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 4.330 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 3.930 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 9.580 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 7.280 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 8.850 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 12.210 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 5.750 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 5.750 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 1.73 |
| Juven | Juvenile tuber | 4.22 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 6.22 | |
| Mother_Juven | Mother tuber of Juvenile | 4.85 |