Detail information of GWHGAAEX001590/evm.TU.scaffold_110.18


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|124502516|gb|ABN13632.1|2.74E-30polyphenol oxidase [Doritis pulcherrima x Phalaenopsis hybrid cultivar]
Swissprottr|P43309|PPO_MALDO1.00E-22Polyphenol oxidase, chloroplastic (Precursor)
trEMBLtr|A3F9I9|A3F9I9_9ASPA1.00E-30Polyphenol oxidase {ECO:0000313|EMBL:ABN13632.1}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000110769196769567-
Transcript Sequence

Network for GWHGAAEX001590

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12143.7PPO1_KFDV121181.10E-34
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00422E1.10.3.1 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Tyrosine metabolismmap00350
Isoquinoline alkaloid biosynthesismap00950

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0004097Molecular Functioncatechol oxidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.090
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata7.490
SRR5643514five period of Gastrodia elata35.190
SRR5643515five period of Gastrodia elata7.790
SRR5643524five period of Gastrodia elata28.440
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.580
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_14.920
SRR6049657Rhizomagastrodiae_C368-T07_good_14.360
SRR6049658Rhizomagastrodiae_C368-T04_good_111.760
SRR6049659Rhizomagastrodiae_C368-T04_good_17.800
SRR6049660Rhizomagastrodiae_C368-T01_good_1220.640
SRR6049661Rhizomagastrodiae_C368-T04_good_17.880
SRR6049662Rhizomagastrodiae_C368-T01_good_1868.740
SRR6049663Rhizomagastrodiae_C368-T01_good_1862.750
SRR6049664Rhizomagastrodiae_C368-T10_good_112.380
SRR6049665Rhizomagastrodiae_C368-T10_good_112.380
SRP279888GastroGastrodia elata tuber 180.31
JuvenJuvenile tuber0.82
Mother_GastroMother tuber of Gastrodia elata 415.32
Mother_JuvenMother tuber of Juvenile 4.37