Detail information of GWHGAAEX001596/evm.TU.scaffold_110.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG43253.00E-53Uncharacterized conserved protein
nrgi|743801794|ref|XP_010926441.1|1.06E-71PREDICTED: partner of Y14 and mago-like isoform X1 [Elaeis guineensis]
trEMBLtr|M0RRX9|M0RRX9_MUSAM1.00E-66Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P13490_001}
TAIRAT1G114003.00E-53partner of Y14-MAGO

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011011167211152483-
Transcript Sequence

Network for GWHGAAEX001596

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09282.9Mago-bind16421.70E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14294WIBG, PYM RNA transport map03013
mRNA surveillance pathwaymap03015

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.900
SRR2545915Juvenile tuber14.440
SRP108465SRR5643513five period of Gastrodia elata14.290
SRR5643514five period of Gastrodia elata13.520
SRR5643515five period of Gastrodia elata13.850
SRR5643524five period of Gastrodia elata12.320
SRR5643525five period of Gastrodia elata12.150
SRR5643528five period of Gastrodia elata15.060
SRR5643658five period of Gastrodia elata11.210
SRR5643659five period of Gastrodia elata11.360
SRR5643660five period of Gastrodia elata9.190
SRR5643661five period of Gastrodia elata9.870
SRR5643662five period of Gastrodia elata7.470
SRR5643663five period of Gastrodia elata8.620
SRR5643664five period of Gastrodia elata8.720
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.570
SRR6049655Rhizomagastrodiae_C368-T10_good_114.870
SRR6049656Rhizomagastrodiae_C368-T07_good_116.480
SRR6049657Rhizomagastrodiae_C368-T07_good_112.990
SRR6049658Rhizomagastrodiae_C368-T04_good_113.050
SRR6049659Rhizomagastrodiae_C368-T04_good_111.180
SRR6049660Rhizomagastrodiae_C368-T01_good_112.280
SRR6049661Rhizomagastrodiae_C368-T04_good_116.230
SRR6049662Rhizomagastrodiae_C368-T01_good_116.710
SRR6049663Rhizomagastrodiae_C368-T01_good_115.460
SRR6049664Rhizomagastrodiae_C368-T10_good_117.360
SRR6049665Rhizomagastrodiae_C368-T10_good_117.360
SRP279888GastroGastrodia elata tuber 13.89
JuvenJuvenile tuber13.11
Mother_GastroMother tuber of Gastrodia elata 18.73
Mother_JuvenMother tuber of Juvenile 13.45