Detail information of GWHGAAEX001602/evm.TU.scaffold_110.40


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743874470|ref|XP_010907085.1|3.82E-101PREDICTED: uncharacterized protein LOC105033842 isoform X4 [Elaeis guineensis]
Swissprottr|Q94AM9|CID4_ARATH2.00E-12Polyadenylate-binding protein-interacting protein 4
trEMBLtr|A0A061F5Q2|A0A061F5Q2_THECC2.00E-70Uncharacterized protein {ECO:0000313|EMBL:EOY12386.1}
TAIRAT4G269907.00E-34Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011015101691547770+
Transcript Sequence

Network for GWHGAAEX001602

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14438.5SM-ATX21982.00E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.080
SRR2545915Juvenile tuber23.320
SRP108465SRR5643513five period of Gastrodia elata17.350
SRR5643514five period of Gastrodia elata15.910
SRR5643515five period of Gastrodia elata16.060
SRR5643524five period of Gastrodia elata17.620
SRR5643525five period of Gastrodia elata17.360
SRR5643528five period of Gastrodia elata18.390
SRR5643658five period of Gastrodia elata19.770
SRR5643659five period of Gastrodia elata19.540
SRR5643660five period of Gastrodia elata24.010
SRR5643661five period of Gastrodia elata20.500
SRR5643662five period of Gastrodia elata21.660
SRR5643663five period of Gastrodia elata20.090
SRR5643664five period of Gastrodia elata21.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.470
SRR6049655Rhizomagastrodiae_C368-T10_good_122.060
SRR6049656Rhizomagastrodiae_C368-T07_good_118.110
SRR6049657Rhizomagastrodiae_C368-T07_good_117.850
SRR6049658Rhizomagastrodiae_C368-T04_good_121.930
SRR6049659Rhizomagastrodiae_C368-T04_good_119.120
SRR6049660Rhizomagastrodiae_C368-T01_good_116.560
SRR6049661Rhizomagastrodiae_C368-T04_good_119.670
SRR6049662Rhizomagastrodiae_C368-T01_good_119.080
SRR6049663Rhizomagastrodiae_C368-T01_good_117.890
SRR6049664Rhizomagastrodiae_C368-T10_good_117.950
SRR6049665Rhizomagastrodiae_C368-T10_good_117.950
SRP279888GastroGastrodia elata tuber 19.32
JuvenJuvenile tuber18.40
Mother_GastroMother tuber of Gastrodia elata 23.66
Mother_JuvenMother tuber of Juvenile 37.60