Gene detail

Database	Orthologs	E value	Annotation
COG	gi\|428312433\|ref\|YP_007123410.1\|	2.00E-67	ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus sp. PCC 7113]
KOG	KOG0840	6.00E-130	ATP-dependent Clp protease, proteolytic subunit
nr	gi\|743775407\|ref\|XP_010918084.1\|	2.31E-152	PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Elaeis guineensis]
Swissprot	tr\|Q94B60\|CLPP4_ARATH	1.00E-133	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic (Precursor)
trEMBL	tr\|I1L564\|I1L564_SOYBN	1.00E-143	ATP-dependent Clp protease proteolytic subunit {ECO:0000256\|RuleBase:RU003567}
TAIR	AT5G45390	6.00E-130	CLP protease P4

Scaffold	Start	End	Strand
GWHAAEX00000110	1560859	1587513	+

Transcript Sequence
>GWHTAAEX001604 GGGCGTTGACACTCAAGCTCCGCATAATTCACCGCCATGATATCTCTTTCCCCGGTCTCCTCTTCGCTAAACTTCAGTTTTCTGCTCTCTTCTTCGGCTTCTAATAAAACCCTAAGATTTCGTCATCTTCCCACTAAATGCTCTCCATTCCGATGTTCTGTTCACATCTCCTCTTCACTTACGTCTTCTCAAAGGTCGGTCTCTGAAAACGAAGCAGCCGTCGGATCGATTTTTCGATTAGGTCTTCAAACCGAAACGGCCTTTCAGTTTTCTTCTTCCTTTCCTTTGTATATTGCGCCTCCCCAGACTCCGGCAACCGCTATGAGGGGTGCGGAGTCAGACATTATGGGCCTGCTGCTGAGAGAGAGGATTGTGTTTCTCGGAAGTAGCATTGATGATTTTGTGGCGGACGCGATTATCAGCCAGCTGTTGCTCCTGGACGCACAAGATCCCACTAAGGATATAAGACTGTTTATTAATTCCACAGGAGGTTCTCTCAGTGCTACGATGGCGATCTACGATATGGTCCAGCTGGTGAGAGCGGACGTGTCAACGGTGGCCCTCGGAATCGCAGCCTCAACATCGTCTATCATCCTCGGCGGTGGGGCAAAGGGGAAGCGGCTGGCAATGCCAAACACAAGGATAATGCTCCACCAGCCTCTCGGGGGAGCGAGCGGGCAGGCCATTGATGTTGAGATCCAGGCAAGAGAGATCATGCACAATAAAGACAACATCACCAGATTAATTTCGAGCTTCACTGGCCGCTCGTTTGAGCAGGTTCTGAAAGATATTGATAGGGACAAATATATGTCTCCTATGGAGGCCGTCGAATATGGAATTATCGATGGCGTCATCGACAGAGATATGATCATTACGTTGTTCCCCGTCCCGGAGAGGGTCAAGCCCAAGCTCAACTATGAGGAGATCAATAAGGATCCCAGAAAATTTTTGATACCGGAGATTCCTGATGAAGAGATTTACTAGTGATGTATTTATGCTGCTTCTTTAATCTTTGTTTTTATCTGCTTTTGTCGGTTGTGTTAAAACACTTCATCTGGATAAAAGCTGTTGAATTTGTAAGCTTTTATTTCTTTGGTTGGAATGTTTGTCTACTGCATTTTTTTCTTACTTCACTGTGAATTGCACTGTATTTTTTAGATTCTCTAAAACATACACATGAAAAAAAAAATCTGTTATATAATATATATAGAATAATTTGAAGTTGTTG

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
K01358	clpP, CLPP	Cell cycle - Caulobacter	map04112
K01358	clpP, CLPP	Longevity regulating pathway - worm	map04212

GO term	Ontology	Name
GO:0006508	Biological Process	proteolysis
GO:0004252	Molecular Function	serine-type endopeptidase activity

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	21.640
SRP064423	SRR2545915	Juvenile tuber	23.000
SRP108465	SRR5643513	five period of Gastrodia elata	37.250
	SRR5643514	five period of Gastrodia elata	41.260
	SRR5643515	five period of Gastrodia elata	39.710
	SRR5643524	five period of Gastrodia elata	40.280
	SRR5643525	five period of Gastrodia elata	27.610
	SRR5643528	five period of Gastrodia elata	31.860
	SRR5643658	five period of Gastrodia elata	28.020
	SRR5643659	five period of Gastrodia elata	34.290
	SRR5643660	five period of Gastrodia elata	32.120
	SRR5643661	five period of Gastrodia elata	40.700
	SRR5643662	five period of Gastrodia elata	42.260
	SRR5643663	five period of Gastrodia elata	40.950
	SRR5643664	five period of Gastrodia elata	37.940
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	36.560
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	35.400
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	42.970
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	33.440
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	30.000
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	25.280
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	29.190
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	28.480
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	48.120
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	39.090
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	60.020
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	60.020
SRP279888	Gastro	Gastrodia elata tuber	36.69
	Juven	Juvenile tuber	20.34
	Mother_Gastro	Mother tuber of Gastrodia elata	27.34
	Mother_Juven	Mother tuber of Juvenile	20.77