Detail information of GWHGAAEX001607/evm.TU.scaffold_110.46


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|242057865|ref|XP_002458078.1|1.23E-09hypothetical protein SORBIDRAFT_03g026625 [Sorghum bicolor]
Swissprottr|Q9M373|AGP20_ARATH1.00E-09Arabinogalactan peptide 20 (Precursor)
trEMBLtr|M0U646|M0U646_MUSAM2.00E-17Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP03840_001}
TAIRAT3G616404.00E-09arabinogalactan protein 20

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011017596951759883+
Transcript Sequence

Network for GWHGAAEX001607

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06376.11AGP35621.10E-16
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.000
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata16.950
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata80.170
SRR5643528five period of Gastrodia elata21.700
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata12.850
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.390
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_110.970
SRR6049657Rhizomagastrodiae_C368-T07_good_149.320
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_118.710
SRR6049661Rhizomagastrodiae_C368-T04_good_122.660
SRR6049662Rhizomagastrodiae_C368-T01_good_18.680
SRR6049663Rhizomagastrodiae_C368-T01_good_18.570
SRR6049664Rhizomagastrodiae_C368-T10_good_111.510
SRR6049665Rhizomagastrodiae_C368-T10_good_111.510
SRP279888GastroGastrodia elata tuber 30.81
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 409.19
Mother_JuvenMother tuber of Juvenile 0.00