Detail information of GWHGAAEX001610/evm.TU.scaffold_110.55


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743879367|ref|XP_010908387.1|0PREDICTED: AP-5 complex subunit zeta-1 [Elaeis guineensis]
trEMBLtr|M5WMX2|M5WMX2_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ15142.1}
TAIRAT3G151605.00E-175Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011019267252020066-
Transcript Sequence

Network for GWHGAAEX001610

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14764.5SPG48331572.20E-35
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0044599Cellular ComponentAP-5 adaptor complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms47.080
SRR2545915Juvenile tuber26.770
SRP108465SRR5643513five period of Gastrodia elata20.480
SRR5643514five period of Gastrodia elata21.260
SRR5643515five period of Gastrodia elata19.920
SRR5643524five period of Gastrodia elata20.690
SRR5643525five period of Gastrodia elata48.550
SRR5643528five period of Gastrodia elata30.670
SRR5643658five period of Gastrodia elata45.730
SRR5643659five period of Gastrodia elata25.380
SRR5643660five period of Gastrodia elata25.250
SRR5643661five period of Gastrodia elata26.760
SRR5643662five period of Gastrodia elata28.410
SRR5643663five period of Gastrodia elata29.700
SRR5643664five period of Gastrodia elata32.480
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.850
SRR6049655Rhizomagastrodiae_C368-T10_good_129.850
SRR6049656Rhizomagastrodiae_C368-T07_good_131.660
SRR6049657Rhizomagastrodiae_C368-T07_good_135.690
SRR6049658Rhizomagastrodiae_C368-T04_good_146.440
SRR6049659Rhizomagastrodiae_C368-T04_good_147.440
SRR6049660Rhizomagastrodiae_C368-T01_good_134.660
SRR6049661Rhizomagastrodiae_C368-T04_good_139.610
SRR6049662Rhizomagastrodiae_C368-T01_good_132.910
SRR6049663Rhizomagastrodiae_C368-T01_good_134.980
SRR6049664Rhizomagastrodiae_C368-T10_good_138.050
SRR6049665Rhizomagastrodiae_C368-T10_good_138.050
SRP279888GastroGastrodia elata tuber 45.54
JuvenJuvenile tuber29.12
Mother_GastroMother tuber of Gastrodia elata 35.67
Mother_JuvenMother tuber of Juvenile 31.99