Detail information of GWHGAAEX001612/evm.TU.scaffold_110.57


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|292493039|ref|YP_003528478.1|5.00E-70(2R)-phospho-3-sulfolactate synthase ComA [Nitrosococcus halophilus Nc 4]
nrgi|672189187|ref|XP_008813774.1|5.40E-159PREDICTED: uncharacterized protein LOC103724328 [Phoenix dactylifera]
trEMBLtr|M0RTE2|M0RTE2_MUSAM4.00E-158Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P18620_001}
TAIRAT4G213202.00E-123Aldolase-type TIM barrel family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011020728922078748-
Transcript Sequence

Network for GWHGAAEX001612

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02679.14ComA152734.40E-78
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms173.910
SRR2545915Juvenile tuber274.630
SRP108465SRR5643513five period of Gastrodia elata81.950
SRR5643514five period of Gastrodia elata87.950
SRR5643515five period of Gastrodia elata88.960
SRR5643524five period of Gastrodia elata100.050
SRR5643525five period of Gastrodia elata160.520
SRR5643528five period of Gastrodia elata201.270
SRR5643658five period of Gastrodia elata92.810
SRR5643659five period of Gastrodia elata155.800
SRR5643660five period of Gastrodia elata160.210
SRR5643661five period of Gastrodia elata153.100
SRR5643662five period of Gastrodia elata135.190
SRR5643663five period of Gastrodia elata145.150
SRR5643664five period of Gastrodia elata148.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1103.330
SRR6049655Rhizomagastrodiae_C368-T10_good_160.760
SRR6049656Rhizomagastrodiae_C368-T07_good_190.170
SRR6049657Rhizomagastrodiae_C368-T07_good_197.870
SRR6049658Rhizomagastrodiae_C368-T04_good_178.050
SRR6049659Rhizomagastrodiae_C368-T04_good_173.710
SRR6049660Rhizomagastrodiae_C368-T01_good_172.020
SRR6049661Rhizomagastrodiae_C368-T04_good_173.510
SRR6049662Rhizomagastrodiae_C368-T01_good_165.350
SRR6049663Rhizomagastrodiae_C368-T01_good_173.130
SRR6049664Rhizomagastrodiae_C368-T10_good_179.760
SRR6049665Rhizomagastrodiae_C368-T10_good_179.760
SRP279888GastroGastrodia elata tuber 192.65
JuvenJuvenile tuber165.72
Mother_GastroMother tuber of Gastrodia elata 70.76
Mother_JuvenMother tuber of Juvenile 150.23