Gene detail

Detail information of GWHGAAEX001618/evm.TU.scaffold_110.64

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|108763934\|ref\|YP_630524.1\|	3.00E-57	cytochrome P450 family protein [Myxococcus xanthus DK 1622]
KOG	KOG0157	0	Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
nr	gi\|703086913\|ref\|XP_010093134.1\|	0	Cytochrome P450 [Morus notabilis]
Swissprot	tr\|O48921\|C97B2_SOYBN	0	Cytochrome P450 97B2, chloroplastic (Precursor)
trEMBL	tr\|W9R369\|W9R369_9ROSA	0	Cytochrome P450 {ECO:0000313\|EMBL:EXB53586.1}
TAIR	AT4G15110	0	cytochrome P450, family 97, subfamily B, polypeptide 3

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000110	2196139	2293180	-

Transcript Sequence
>GWHTAAEX001618 TTGAGTTTTGGATCAAATAAAATTGCAGGCCATAAATGACAAGATGAAGTGCTGTGACATGAGTTGAAACAGAGCAAAGGTAATTATTATAATGGGGCAATACTGAGGCAGGAGCAACAACATATGATGCTGTGTGAAGCTGCTTAGGATGCAAGTGGAAAATTACAACTCTGAAATGAAATAGCGGTGGATATGGTGCAGTTACTAAATGCAAAACCCAAACCGAACTAGCTCGCAACTCTCAAGTGGGACTCATTTGTCATCCATTTTGTCAGCCGAAGCCATCGACGATGAATTCGACACTTCTTCTGCCTCCGTCTAGATACGGCGCCACCGTCGCTTTCCCTCGCCCCCTCGCCTCTCGATCTAAAACCCATTTTACGGCCCCTGGTTTTCCTTTAATTTCTCGGAAGAAAGGGCCTCAAATCCTTATATGCCGATCTTCTGCTACTGAAGAACCTAAAGTGAAGTTACAGTCTTCTTATCCTGAAGAACGTAGGGTGAAAAAAAATCTTCTAGACAATGCTAGCAAGCTTCTTACAAACATTTTAAGTGATGGAAAACTTAGATCAATGCCACTTGCTGAAGGTGGTTTATCAGATTCGTTCGGTCGGCCTCTTTTCTTTAAGCTATATGATTGGTTTTTACAGCTTGGTTCTGTTTATAAACTTACATTTGGACCTAAATCATTTGTTGTGATATCTGATCCTATTGTTGCAAGACATATTCTTAGGGAAAATACATTTTCTTATGACAAGGGAGTACTTGCTGATATCCTTGAACCAATAATGGGAAAGGGGCTTATTCCTGCAGATCATGATACTTGGAAGCAGCGAAGGAGAGTAATTGCACCGGGGTTTCATTCTACATTTCTGGAAGCTATGATTAAAGTTTTCATTGATTGTTCAGAGAGAACGGTGGCCAAGCTTGAGAGTCTTCTTGATGGTGCATATATAAAAGATCAAACAATCGAGTTAGACCTTGAAGCTGAATTTTCAAATCTGGCACTTGACGCTATTGGATTAGCTATATTCAACTATGATTTCTGTTCGGTCACTAAAGAATCTCCAGTAATTAAGGCAGTTCATGGCACTTTATTTGAGGCTGAGCATCGGTCAACATTTTATATACCTTACTGGAAACTTCCTTTTGCAAAATGGATCTTTCCAAGGCAGCGCAAATTCCATAGTGACTTGATGGTCATAAATAACTGCCTTGATAGCCTTATCAGAAATGCAAAAGAGACAAGGGAGGAAGCTGATTTAGAAAAACTTCAGCAAAGAGATTACTCGTCTTTAAAGGATACAAGCTTATTGAGGTTTCTTGTTGACATGCGTGGAGCTGATGTCAATGATCGTCAGCTTAGGGATGACCTTATTACCATGCTTATTGCTGGGCATGAAACGACTGCTGCTGTTCTTACGTGGGCAGTTTTTCTTCTTGCTCAGAACCCATCCAAAATGAGAAAGGTGCAGGAAGAGGTTGATTCTGTGCTTGTTGAAAAGCGACCTACCCTTAAATGCCTCAAAAAGTTGGAGTACATTCGGCTTGTCATTGCTGAAGCTCTTCGCCTTTATCCACAGCCACCACTTTTGATAAGACGTTCTCTCCAAGATGATAAATTGCCTGGTGGGTATAAGGGTCATGATGAAGGATATGAAATTCCTGCTGGAACTGATATATTTATTTCTGTATTCAATCTTCACAGGTCTCCATATTTATGGGACCGTCCTAATGAATTTGAACCAGAAAGATTCTTGATTCCAAAGAGAAGTGATGGCGATGGATGGGAAGGATTTGACCCAACCCGAAGTCCCGGAGCGCTGTACCCAAATGAGGTGATGGCAGACTTCTCCTTCCTGCCGTTCGGCGGGGGGCAGCGCAAATGTGTTGGCGACCAATTTGCACTGCTGGAATCCACGGTGGCACTATCCCTTCTCTTTCACAAGTTCGATGTCGAGCTTAGGGACTCGCCGGAAGATGTTAAGCTGGTGACTGGAGCTACCATTCATACTAAAAATGGCTTGTGGTGCAAAATCAGGAGAAGGGCAGCAGCGCACAAATAGCTTGGAGGACTGTTTTGATCCTTAGTGATGCTGCTTATTGAAGATATTCTCTGAAATTATGCAGCGATGACCTTTTTAAAACTTTATAATGATATGAATGCATGATTTTACTATATATATATATATATATA

Network for GWHGAAEX001618

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.21	p450	120	579	5.30E-78

Protein Sequence

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP97B3

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0020037	Molecular Function	heme binding
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506	Molecular Function	iron ion binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	25.000
SRP064423	SRR2545915	Juvenile tuber	23.840
SRP108465	SRR5643513	five period of Gastrodia elata	39.180
	SRR5643514	five period of Gastrodia elata	45.860
	SRR5643515	five period of Gastrodia elata	39.650
	SRR5643524	five period of Gastrodia elata	43.930
	SRR5643525	five period of Gastrodia elata	27.000
	SRR5643528	five period of Gastrodia elata	19.910
	SRR5643658	five period of Gastrodia elata	28.150
	SRR5643659	five period of Gastrodia elata	30.210
	SRR5643660	five period of Gastrodia elata	29.270
	SRR5643661	five period of Gastrodia elata	27.200
	SRR5643662	five period of Gastrodia elata	38.780
	SRR5643663	five period of Gastrodia elata	37.700
	SRR5643664	five period of Gastrodia elata	37.460
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	32.320
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	36.640
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	32.010
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	35.890
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	24.910
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	31.780
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	29.500
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	28.380
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	30.820
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	25.200
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	38.190
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	38.190
SRP279888	Gastro	Gastrodia elata tuber	34.30
	Juven	Juvenile tuber	38.11
	Mother_Gastro	Mother tuber of Gastrodia elata	16.33
	Mother_Juven	Mother tuber of Juvenile	23.36