Detail information of GWHGAAEX001623/evm.TU.scaffold_110.70


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|206889235|ref|YP_002248472.1|0phosphoribosylformylglycinamidine synthase [Thermodesulfovibrio yellowstonii DSM 11347]
KOGKOG19070Phosphoribosylformylglycinamidine synthase
nrgi|743765030|ref|XP_010912732.1|0PREDICTED: probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial [Elaeis guineensis]
Swissprottr|Q9M8D3|PUR4_ARATH0Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial (Precursor)
trEMBLtr|B9HMK5|B9HMK5_POPTR0Uncharacterized protein {ECO:0000313|EMBL:EEE89478.2}
TAIRAT1G742600purine biosynthesis 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011024890872501673-
Transcript Sequence

Network for GWHGAAEX001623

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02769.21AIRS_C5386891.10E-20
PF02769.21AIRS_C94810715.10E-14
PF13507.5GATase_5114614152.80E-103
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01952PFAS, purL Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Purine metabolismmap00230

Gene Ontology

GO term OntologyName
GO:0006189Biological Process'de novo' IMP biosynthetic process
GO:0004642Molecular Functionphosphoribosylformylglycinamidine synthase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.960
SRR2545915Juvenile tuber19.350
SRP108465SRR5643513five period of Gastrodia elata14.810
SRR5643514five period of Gastrodia elata17.070
SRR5643515five period of Gastrodia elata14.430
SRR5643524five period of Gastrodia elata15.240
SRR5643525five period of Gastrodia elata8.330
SRR5643528five period of Gastrodia elata9.150
SRR5643658five period of Gastrodia elata6.670
SRR5643659five period of Gastrodia elata19.390
SRR5643660five period of Gastrodia elata20.900
SRR5643661five period of Gastrodia elata19.880
SRR5643662five period of Gastrodia elata21.730
SRR5643663five period of Gastrodia elata19.910
SRR5643664five period of Gastrodia elata19.200
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.150
SRR6049655Rhizomagastrodiae_C368-T10_good_116.290
SRR6049656Rhizomagastrodiae_C368-T07_good_118.300
SRR6049657Rhizomagastrodiae_C368-T07_good_115.960
SRR6049658Rhizomagastrodiae_C368-T04_good_115.720
SRR6049659Rhizomagastrodiae_C368-T04_good_113.350
SRR6049660Rhizomagastrodiae_C368-T01_good_115.990
SRR6049661Rhizomagastrodiae_C368-T04_good_117.250
SRR6049662Rhizomagastrodiae_C368-T01_good_123.560
SRR6049663Rhizomagastrodiae_C368-T01_good_119.970
SRR6049664Rhizomagastrodiae_C368-T10_good_118.200
SRR6049665Rhizomagastrodiae_C368-T10_good_118.200
SRP279888GastroGastrodia elata tuber 19.01
JuvenJuvenile tuber19.01
Mother_GastroMother tuber of Gastrodia elata 12.68
Mother_JuvenMother tuber of Juvenile 15.38