Detail information of GWHGAAEX001626/evm.TU.scaffold_110.77


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|320161777|ref|YP_004175002.1|5.00E-86ATP phosphoribosyltransferase [Anaerolinea thermophila UNI-1]
KOGKOG28310ATP phosphoribosyltransferase
nrgi|672120640|ref|XP_008783595.1|0PREDICTED: ATP phosphoribosyltransferase, chloroplastic-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q9S762|HIS1A_ARATH0ATP phosphoribosyltransferase 1, chloroplastic (Precursor)
trEMBLtr|W9QK95|W9QK95_9ROSA0ATP phosphoribosyltransferase {ECO:0000313|EMBL:EXB29027.1}
TAIRAT1G580800ATP phosphoribosyl transferase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011027708712787931-
Transcript Sequence

Network for GWHGAAEX001626

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01634.17HisG1142891.50E-37
PF08029.10HisG_C2953789.00E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00765hisG Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of amino acidsmap01230
Histidine metabolismmap00340

Gene Ontology

GO term OntologyName
GO:0000105Biological Processhistidine biosynthetic process
GO:0000287Molecular Functionmagnesium ion binding
GO:0003879Molecular FunctionATP phosphoribosyltransferase activity
GO:0005737Cellular Componentcytoplasm

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms115.560
SRR2545915Juvenile tuber112.480
SRP108465SRR5643513five period of Gastrodia elata67.770
SRR5643514five period of Gastrodia elata70.440
SRR5643515five period of Gastrodia elata68.160
SRR5643524five period of Gastrodia elata66.990
SRR5643525five period of Gastrodia elata39.680
SRR5643528five period of Gastrodia elata32.470
SRR5643658five period of Gastrodia elata43.060
SRR5643659five period of Gastrodia elata65.240
SRR5643660five period of Gastrodia elata61.520
SRR5643661five period of Gastrodia elata66.000
SRR5643662five period of Gastrodia elata67.580
SRR5643663five period of Gastrodia elata67.570
SRR5643664five period of Gastrodia elata65.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1105.450
SRR6049655Rhizomagastrodiae_C368-T10_good_181.840
SRR6049656Rhizomagastrodiae_C368-T07_good_1105.270
SRR6049657Rhizomagastrodiae_C368-T07_good_1101.600
SRR6049658Rhizomagastrodiae_C368-T04_good_192.670
SRR6049659Rhizomagastrodiae_C368-T04_good_182.710
SRR6049660Rhizomagastrodiae_C368-T01_good_183.440
SRR6049661Rhizomagastrodiae_C368-T04_good_198.320
SRR6049662Rhizomagastrodiae_C368-T01_good_183.090
SRR6049663Rhizomagastrodiae_C368-T01_good_181.130
SRR6049664Rhizomagastrodiae_C368-T10_good_188.650
SRR6049665Rhizomagastrodiae_C368-T10_good_188.650
SRP279888GastroGastrodia elata tuber 54.63
JuvenJuvenile tuber57.07
Mother_GastroMother tuber of Gastrodia elata 27.86
Mother_JuvenMother tuber of Juvenile 29.94