Gene detail

Detail information of GWHGAAEX001640/evm.TU.scaffold_111.3

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|428319971\|ref\|YP_007117853.1\|	2.00E-62	amino acid adenylation domain protein [Oscillatoria nigro-viridis PCC 7112]
KOG	KOG1178	7.00E-173	Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes
nr	gi\|743859435\|ref\|XP_010942743.1\|	0	PREDICTED: putative acyl-activating enzyme 19 [Elaeis guineensis]
Swissprot	tr\|F4K1G2\|AEE19_ARATH	0	Putative acyl-activating enzyme 19
trEMBL	tr\|A0A061F726\|A0A061F726_THECC	0	AMP-dependent synthetase and ligase family protein, putative isoform 1 {ECO:0000313\|EMBL:EOY10309.1}
TAIR	AT5G35930_1	7.00E-173	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000111	115201	258445	+

Transcript Sequence
>GWHTAAEX001640 AAAATAGACACTGACTGCCTGTTGTGCTGCACCCAAACACCATTCATCGTCCCAAATTCGTCTTAGACATCGGCCGAAGAGATGCGATCCTGCTGCATTTCGCACGAGTTCCTCAACTCTGCTACTCAGAATCCGCGTCGTGTCGCCATCGTGCACGCCGACGGCGGTCTACGATTGCTCAGGGAGTCTCGTGCGAACCTTGTTGGGCCATTTTCCTCATCATCATCTGCTCCCGCCTCCGTCTCTGGTACCGATATCAACTACCACACGAGCTGCAAACCTTCCTCTCCTCGGTTGTTTTCTGGCGATGAGATCTTCACATTTGAGGATCTTCTTTATGCTGTTGATTCTCTTAGCCGCCGCATTCGTTGTGCCCTAGATGGCGGCCTCGACAAAGGTTCTGTGCATTTTTTGTCTGATGGGTTGAAAAATGGAGTAGACGAGCTTGGACAAATGAACTATATGCCTCATATAATAGGGGTGCAAATCGGGCCCTCGGTAGAATATATTGTTGCTGTTCTGTCCATCTTACGATGTGGTGAGGCCTTCTTGCCTTTGGATCCATCGTGGCCAGAGGACAGAACACTTTCTGTTATTTCTTCTTCAAAAACTCCTCTTGTTATTCGAGTGAAGTCTGATTACAACATGCAGTATGGAAGCTCACAAGTGGAAGGTGATGATACTGATTGGGTAGTTAATGGGCAGGACATTTTTGTTTTGTGCTTTTCTATGAAAGAAAAATTTGTAAAAAATTATGAGCAGGCTGGAAATTTAGTTTGGCCATGTGAAAGCAACAAACCGAGGAAGTTTTGTTATTTGATGTACACTTCGGGTTCAACTGGAAACTCTAAAGGCGTTTGTGGTACAGAATTAGGTCTTCTTAATAGATATTGGTGGATGCAAGATCAGTATCCCATTTCACAGGAGGATGTTTTATTGTTCAAGACCTCAATCAGCTTTGTTGACCATCTTCAGGAGTTCCTTGGTGCTGTTTTGGCTGGTGCTGTGCTTGTTATTCCTCCTTATTTTGAGCTGAAATATCCTGGATATACAGTTGATTTTCTTAAGGCATATGGCATTTCCAGGTTTACCACTGTTCCATCTCTAGCAAGAGACCTTCTCTCCTTGGATAATTCACAATCAGTAAAGCTTCTCAACTCACTAAAAGTGTTGGTGCTTAGTGGGGAAGTTTTTCCTATATCTTTATGGAGAGGCTTGCATGATCATTTACCAGAGACTGCCATTTTAAATTTATATGGAAGCACAGAGGTTGCTGGGGATTGTTCATGTTTTGATTGCAAAATGATGCCGAGTATATTGGAAACTGTGCAATTAAATAGTGTGCCCATTGGAAAACCTATATCTAATTGTGTAATTGATCTTATCACCGAACAAAATGAAGATAATACAGGTGAAATATGTGTTAGTGGGATGTGCTTATTTGCTGGATATATTGATGAAATATCACATTTATCTTTGAATGATGATTGCACTCAATTACATTTCAAAACTGGTGATAGGGCCAGATGTCTCACAAGTGGCGATTTTGTCTTCCTTGGGAGAAAAGATCGTATTGTTAAAATTAGAGGACAACGGATCGCTTTAGAGGAGACTGAAAATATGCTAAGGGAACATCCTGACATAGTGGATGCTGCAGTAATTGCTCAAAAGACCAATGGGCATTGCTACCATCTTGTGGCTTTTATTATTGTGAAACCAATTGATTGCTGTTCGGATAGGGATGTAGCCAGTGTAAGTATACATGATGAAGAGGAGTTGATTGCATCTGTCAGAATATGGTTGTTGAGGAAGTTGCCACCTGCAATGTTGCCTGCTATTTTTGTTCGAACAGAATTGCTGCCCAAGTCTTTCTCTGGAAAGGTAGATTACTTAATGTTAAGTAGTTCGACATATGTGCCAAAGAGCCTTAAAAGGGATTTTGAAGAAAACATTTCTGAAAAACTTCATTTGCAAGTTATCAAAAAGGTATTCCATACTGCACTGCCTGTTGAAGATGTGTCAGATGATGATGATTTCTTCATGTTGGGAGGAAACTCACTTTTAGCTGCTCATGTGGCATATAATTTGGGAATAGATGTGAGGTTGCTTTATGCCTTTCCTAGCCCAATAAGACTTTTAAAAGCTTTACTGGATCAGAAGCAGAATTTAGCTTTTTCTAATTCCGATACCATTTTGGATAAACGATTAAGAGTGGACAAGAGCATGCTAAATTTGTTTGAGATAACAGGAGATTCTTCGAATAGTACTTTACTTGGTGTGGAAATGAAGGAAAATATTGGAATGTGGATTCCTGATTCTGTGAAATTTGATAGGCGTCAGTTAACGAACCACCCAAAAAGGAATAAAGAATTGGCATATTGGGATAGCATAACAAAAGTTTCATGCTTTTATCCACACGGTGGTGTTTCAGCATACAAGGATGATCCATGGAATAGTAAATTTGAACTTCCTAAACTGTGTTCGTTGAGTCGTTGCAACCAAGTTTTGTTAGGTTCTGAAGGTGTATTAAAATTGGAATTTCAAGATGGCTTATCTCTTGATTTTTCAATACATGAAAAAGGCTATTTACAAGAATTGTGGAAGGTCTTGCTTAAATCATGCGTGGATGCTTCACCACTTCTCATGTTAAATGATGAGAAGGCTTACATTTTTATTGGCTCCCATTCGCAAATATTTCTTTGCATAGATGCTCTTAGTGGCGCTGTACAGTGGCAAGTCATTCTGGAAGGACGTATTGAATGCTCAGCTGCAATTACAGGAGATTTCTCTCAGATTGTTGTGGGATGCTACAAAGGGAAGATTTATTTTCTTGATTGCACAACTGGCAAGATATTGGGAACATTTCAAACCTTTGGTGAGGTCAAAATGCAGCCTGTTGTAGATGAAGATAGAGGTTTGATATGGTGCGGATCGTATGACCATCATTTGTACGCTCTGGATTATAAAAATCACCTGTGCATTTCCCAGATTTTTTGTAGTGGAAGTCTTTATGGTTCTCCTGCACTAGACAAGGTACGTAACATGCTATACGTTGCGACCACAAGTGGCGTTGTTAGTGGAGTGTCATTGGAGGTTGCACCGTTTTACATTTTATGGAGTTACAAGGCAGATGCTCCAATATTTGGATCTTTATGTCTAGACTCTTCCAGTGGTAATGTCTTCTGCTGCTCGGTTGATGGCAGTGTGATAGCTTTAAACCCAAAAGGGAAAACTGTTTGGAAGACATGTGTTGGTGGTCCAATTTTTGCTGGGGCATGCATATCGTCGTCTCTTTCTTCCCAGTTGTTGATTTGTTGCCGAAATGGTGGCTTTTACTCCATTGACACGGATGACGGAGCTTTATTATGGGACTATCAGACCGGCGACCCAATCACAGCATCGGCTTATGTGGATGATTTTTCTTGTTTGAAGGGCAAACCTCCACGTCCATGCTACAGGCTGGCATGCATTTGCACCAGCTCGGGAAGAATCATCGTTCTTCGGATCCATCCGAATGCTAAGCAAGAGAGGGCCGCCGGAATTCGTGGAAGTCTATTGGTAGAGGAATTCGCCTCTGCTAGTCTCTCAGGCGGCATCTTCTCGTCGCCAGTGATGATCGGAGGCCGCATCTTCGTCGGCTGTAGGGATGATTGCATGCACTGTGTTACTCTCGGAACTCGATGATAAGACAGTTGTAAGATTTGTTCAATAATGTAAAACCTTATCTCAAAGGCATAGAGGTCATGTGTGTCCTAATGTTACTTTTCTTTTAAGTGCAATCCAATAAAGTGCATTTTTAAATTTAA

Network for GWHGAAEX001640

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00501.27	AMP-binding	132	502	9.20E-53
PF13193.5	AMP-binding_C	510	600	7.80E-07
PF13360.5	PQQ_2	874	963	0.00031
PF13360.5	PQQ_2	1007	1160	5.80E-07

Protein Sequence

>GWHPAAEX001640
MRSCCISHEFLNSATQNPRRVAIVHADGGLRLLRESRANLVGPFSSSSSAPASVSGTDINYHTSCKPSSPRLFSGDEIFTFEDLLYAVDSLSRRIRCALDGGLDKGSVHFLSDGLKNGVDELGQMNYMPHIIGVQIGPSVEYIVAVLSILRCGEAFLPLDPSWPEDRTLSVISSSKTPLVIRVKSDYNMQYGSSQVEGDDTDWVVNGQDIFVLCFSMKEKFVKNYEQAGNLVWPCESNKPRKFCYLMYTSGSTGNSKGVCGTELGLLNRYWWMQDQYPISQEDVLLFKTSISFVDHLQEFLGAVLAGAVLVIPPYFELKYPGYTVDFLKAYGISRFTTVPSLARDLLSLDNSQSVKLLNSLKVLVLSGEVFPISLWRGLHDHLPETAILNLYGSTEVAGDCSCFDCKMMPSILETVQLNSVPIGKPISNCVIDLITEQNEDNTGEICVSGMCLFAGYIDEISHLSLNDDCTQLHFKTGDRARCLTSGDFVFLGRKDRIVKIRGQRIALEETENMLREHPDIVDAAVIAQKTNGHCYHLVAFIIVKPIDCCSDRDVASVSIHDEEELIASVRIWLLRKLPPAMLPAIFVRTELLPKSFSGKVDYLMLSSSTYVPKSLKRDFEENISEKLHLQVIKKVFHTALPVEDVSDDDDFFMLGGNSLLAAHVAYNLGIDVRLLYAFPSPIRLLKALLDQKQNLAFSNSDTILDKRLRVDKSMLNLFEITGDSSNSTLLGVEMKENIGMWIPDSVKFDRRQLTNHPKRNKELAYWDSITKVSCFYPHGGVSAYKDDPWNSKFELPKLCSLSRCNQVLLGSEGVLKLEFQDGLSLDFSIHEKGYLQELWKVLLKSCVDASPLLMLNDEKAYIFIGSHSQIFLCIDALSGAVQWQVILEGRIECSAAITGDFSQIVVGCYKGKIYFLDCTTGKILGTFQTFGEVKMQPVVDEDRGLIWCGSYDHHLYALDYKNHLCISQIFCSGSLYGSPALDKVRNMLYVATTSGVVSGVSLEVAPFYILWSYKADAPIFGSLCLDSSSGNVFCCSVDGSVIALNPKGKTVWKTCVGGPIFAGACISSSLSSQLLICCRNGGFYSIDTDDGALLWDYQTGDPITASAYVDDFSCLKGKPPRPCYRLACICTSSGRIIVLRIHPNAKQERAAGIRGSLLVEEFASASLSGGIFSSPVMIGGRIFVGCRDDCMHCVTLGTR

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding
GO:0003824	Molecular Function	catalytic activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	6.420
SRP064423	SRR2545915	Juvenile tuber	6.530
SRP108465	SRR5643513	five period of Gastrodia elata	9.200
	SRR5643514	five period of Gastrodia elata	7.870
	SRR5643515	five period of Gastrodia elata	8.470
	SRR5643524	five period of Gastrodia elata	8.740
	SRR5643525	five period of Gastrodia elata	5.000
	SRR5643528	five period of Gastrodia elata	4.210
	SRR5643658	five period of Gastrodia elata	3.360
	SRR5643659	five period of Gastrodia elata	6.920
	SRR5643660	five period of Gastrodia elata	6.930
	SRR5643661	five period of Gastrodia elata	6.370
	SRR5643662	five period of Gastrodia elata	7.110
	SRR5643663	five period of Gastrodia elata	6.600
	SRR5643664	five period of Gastrodia elata	5.700
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.390
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.750
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.370
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	9.000
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	8.550
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	10.360
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.510
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	8.240
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.120
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.780
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.410
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.410
SRP279888	Gastro	Gastrodia elata tuber	7.03
	Juven	Juvenile tuber	11.26
	Mother_Gastro	Mother tuber of Gastrodia elata	8.15
	Mother_Juven	Mother tuber of Juvenile	9.16