Detail information of GWHGAAEX001642/evm.TU.scaffold_111.5


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|374329874|ref|YP_005080058.1|3.00E-07NmrA-like protein [Pseudovibrio sp. FO-BEG1]
nrgi|743859399|ref|XP_010942733.1|1.43E-128PREDICTED: isoflavone reductase-like protein isoform X1 [Elaeis guineensis]
Swissprottr|P52580|IFRH_MAIZE4.00E-116Isoflavone reductase homolog IRL
trEMBLtr|V5NQG6|V5NQG6_LARTR9.00E-116Allylphenol synthase 2 {ECO:0000313|EMBL:AHA90805.1}
TAIRAT4G392303.00E-108NmrA-like negative transcriptional regulator family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000111386219391529+
Transcript Sequence

Network for GWHGAAEX001642

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05368.12NmrA92491.30E-67
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.620
SRR2545915Juvenile tuber17.560
SRP108465SRR5643513five period of Gastrodia elata54.080
SRR5643514five period of Gastrodia elata16.110
SRR5643515five period of Gastrodia elata19.760
SRR5643524five period of Gastrodia elata12.990
SRR5643525five period of Gastrodia elata0.270
SRR5643528five period of Gastrodia elata0.550
SRR5643658five period of Gastrodia elata0.210
SRR5643659five period of Gastrodia elata1.050
SRR5643660five period of Gastrodia elata0.180
SRR5643661five period of Gastrodia elata0.370
SRR5643662five period of Gastrodia elata0.610
SRR5643663five period of Gastrodia elata0.280
SRR5643664five period of Gastrodia elata0.560
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_194.290
SRR6049655Rhizomagastrodiae_C368-T10_good_1240.350
SRR6049656Rhizomagastrodiae_C368-T07_good_1254.220
SRR6049657Rhizomagastrodiae_C368-T07_good_169.600
SRR6049658Rhizomagastrodiae_C368-T04_good_1114.060
SRR6049659Rhizomagastrodiae_C368-T04_good_187.280
SRR6049660Rhizomagastrodiae_C368-T01_good_122.970
SRR6049661Rhizomagastrodiae_C368-T04_good_1149.510
SRR6049662Rhizomagastrodiae_C368-T01_good_124.550
SRR6049663Rhizomagastrodiae_C368-T01_good_112.670
SRR6049664Rhizomagastrodiae_C368-T10_good_1284.630
SRR6049665Rhizomagastrodiae_C368-T10_good_1284.630
SRP279888GastroGastrodia elata tuber 0.38
JuvenJuvenile tuber1.08
Mother_GastroMother tuber of Gastrodia elata 1.59
Mother_JuvenMother tuber of Juvenile 0.53