Gene detail

Detail information of GWHGAAEX001646/evm.TU.scaffold_111.10

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|428316493\|ref\|YP_007114375.1\|	1.00E-46	alpha/beta hydrolase fold protein [Oscillatoria nigro-viridis PCC 7112]
KOG	KOG1552	8.00E-147	Predicted alpha/beta hydrolase
nr	gi\|672201497\|ref\|XP_008778152.1\|	3.13E-164	PREDICTED: alpha/beta hydrolase domain-containing protein 17B-like isoform X1 [Phoenix dactylifera]
trEMBL	tr\|M0RXI3\|M0RXI3_MUSAM	3.00E-164	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P06250_001}
TAIR	AT1G32190_1	8.00E-147	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000111	445001	473940	-

Transcript Sequence
>GWHTAAEX001646 GAAATGAGAGAGTGAGCTTCTTCTGAAACCCTAGCCTCAGCTACATCCTTAACCAACTCCCCAAACTAACTAAGAAGGCCCACTTGAGCAATCCCACCAGTTAAAGTAGAGAGAGAGATGTCTATCTTCATTTTCCTTCTTTCTGGTTTCCTCTCTTCTCTTCCCAAATTTATAAATCATTCTGCTCCAAATCGGATTTTGATTAGAGCAATCCTCGCGATGCTCATCTAAAAAAAACAAAGCTTTTATCTTTCTTTTTGACCCAAACTAGGCAAAAAGTTGCGTTCAATCCAACTCCCCTGTCATCATTTACTTCCTTCACACGCATTGCAGAGAGAGAGAGAAAAAGGGGTGTTTCACTTTCCAGCTTCTGTTGAGGGGATGGATATCTTCTTCCTGTTCTAACCCTTAAACCTTAGCAAAACCCTGAGCTCTCGACCTGTCTTTTCACAAAAAAGAAATCATTTCTAAAAGGCTGACTTTTCGAGCAAATCTCTGAAAATTCCCAGCCGCTTGCTTTGTGATTTCCCCTCTGTCAATGAGCTGAACTTGCCTCAATGTTATGCGGGCGCTCAGTTTCGGATTTGGCTGCTAAATTTGCCTTCTTTCCACCACAGCCACCAAGTTATGGCATCAGAAAGGATGAAGTTCTTGGAGGGAAGCTGTTGGCCACTGGCATTCCCAGAGACCCCTCCATGGATGTGCTGATGGTAGAAAACGCAAGGGGAAATAAGATTGTTGCTTTCTATTTCAGAAATCCATATGCCAGGCTCACTCTGCTCTACTCCCATGGCAATGCCACTGATCTCGGGCAGCTCTACGACCTCTTTGTTCAACTCAAGCTCAATCTCAGAATTAATTTGATGGGATATGACTACTCAGGGTATGGGGCCTCCTCTGGTAAGCCAAGTGAATCCAACACTTATGCAGACATAGAAGCCATCTATGGGTGCCTTCAGACAGAATATGGAGTCAGTCAGGAGGACTTGGTATTGTATGGCCAATCCCTTGGCAGCGGGCCCACATTACACCTGGCAGCCAGTTTGCCGAGATTGAGAGGTGTTGTTCTTCACAGTGCGATATTGTCCGGCCTTCGGGTCTTATGTCATGTGAATTTCTCATTCTGCATGGATATTTATAAAAATGTGAACAAGATTAAAAAGGTGAAATGCCCAGTGCTTGTAATCCATGGAACTGATGATGAAGTTGTGAACTGGCTCCATGGAAATAGGCTGTGGAGGCTTGCTCGGGACCCGTATGATCCCTTGTGGATCAAAGGGGGCACACACTGCAATCTGGAGCTCTACCCCGACTACATAATCCATCTCTCCCACTTCATCAAGGAAATGGAAAATGCTACCACGACGCAAAGGCTTAAAATACTTCGCCAAAGCCTTGGAAGGACAAGACCGGACATCAAAAGTACCACCACTTTTACTGCAAATTGTTGTTTCAGGAGAAAAATCCCAAAGCCAAATTGCTCCAACTGCTGCAGCAGCAGTTGCTGTAGCAGCAATTGCTGTAGCAACAGTTTTTGCTGCAGTTGTTGCTGCTGCAGTTGGAATTGGAAACGGTCTTTGTGTTTCTGTAATTGTTGGGGTAGGATAAATGGATAGAGGTGATGATTATAAGTGTGCTCTATTTGTGCAGGAAGCCTGATTAGATTGTCTGACCCATTGAACCTTTTTCAAGTGATGAATCTGATAATATGCCTTTGTTTTTCAACTGTTTGTTTTCCCTAGGTGGTTTCTGGTTGAAAAATTGTAATGCCAATAGTACAAAAAAGGATAAATGATGCTTAGGGGATATCAAAATTTGTGGCATGGTTTCTAACTTCCCTATGAACAGC

Network for GWHGAAEX001646

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.900
SRP064423	SRR2545915	Juvenile tuber	1.880
SRP108465	SRR5643513	five period of Gastrodia elata	5.640
	SRR5643514	five period of Gastrodia elata	7.580
	SRR5643515	five period of Gastrodia elata	4.370
	SRR5643524	five period of Gastrodia elata	8.680
	SRR5643525	five period of Gastrodia elata	18.280
	SRR5643528	five period of Gastrodia elata	19.100
	SRR5643658	five period of Gastrodia elata	13.300
	SRR5643659	five period of Gastrodia elata	4.190
	SRR5643660	five period of Gastrodia elata	2.610
	SRR5643661	five period of Gastrodia elata	0.740
	SRR5643662	five period of Gastrodia elata	2.640
	SRR5643663	five period of Gastrodia elata	3.170
	SRR5643664	five period of Gastrodia elata	6.870
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.190
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.060
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.580
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.520
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.770
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	10.270
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.610
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.780
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.310
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.440
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.510
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.510
SRP279888	Gastro	Gastrodia elata tuber	9.78
	Juven	Juvenile tuber	11.66
	Mother_Gastro	Mother tuber of Gastrodia elata	8.03
	Mother_Juven	Mother tuber of Juvenile	9.66