Detail information of GWHGAAEX001652/evm.TU.scaffold_111.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG30604.00E-157Uncharacterized conserved protein
nrgi|743832280|ref|XP_010934934.1|5.59E-175PREDICTED: ER membrane protein complex subunit 2-A-like [Elaeis guineensis]
trEMBLtr|A0A061F258|A0A061F258_THECC3.00E-165Prenylyltransferase superfamily protein {ECO:0000313|EMBL:EOY11116.1}
TAIRAT3G048304.00E-157Protein prenylyltransferase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000111737168760845+
Transcript Sequence

Network for GWHGAAEX001652

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms57.370
SRR2545915Juvenile tuber90.750
SRP108465SRR5643513five period of Gastrodia elata81.130
SRR5643514five period of Gastrodia elata94.180
SRR5643515five period of Gastrodia elata92.450
SRR5643524five period of Gastrodia elata94.570
SRR5643525five period of Gastrodia elata60.000
SRR5643528five period of Gastrodia elata68.980
SRR5643658five period of Gastrodia elata57.920
SRR5643659five period of Gastrodia elata110.720
SRR5643660five period of Gastrodia elata119.790
SRR5643661five period of Gastrodia elata120.570
SRR5643662five period of Gastrodia elata118.180
SRR5643663five period of Gastrodia elata110.300
SRR5643664five period of Gastrodia elata118.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_176.630
SRR6049655Rhizomagastrodiae_C368-T10_good_178.170
SRR6049656Rhizomagastrodiae_C368-T07_good_180.840
SRR6049657Rhizomagastrodiae_C368-T07_good_175.960
SRR6049658Rhizomagastrodiae_C368-T04_good_166.180
SRR6049659Rhizomagastrodiae_C368-T04_good_168.120
SRR6049660Rhizomagastrodiae_C368-T01_good_171.300
SRR6049661Rhizomagastrodiae_C368-T04_good_170.070
SRR6049662Rhizomagastrodiae_C368-T01_good_182.220
SRR6049663Rhizomagastrodiae_C368-T01_good_180.170
SRR6049664Rhizomagastrodiae_C368-T10_good_1101.030
SRR6049665Rhizomagastrodiae_C368-T10_good_1101.030
SRP279888GastroGastrodia elata tuber 105.83
JuvenJuvenile tuber132.12
Mother_GastroMother tuber of Gastrodia elata 77.11
Mother_JuvenMother tuber of Juvenile 138.68