Detail information of GWHGAAEX001654/evm.TU.scaffold_111.23


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743855006|ref|XP_010941181.1|5.52E-109PREDICTED: uncharacterized protein LOC105059551 isoform X2 [Elaeis guineensis]
Swissprottr|Q9FFI5|NAC86_ARATH2.00E-59NAC domain-containing protein 86 {ECO:0000312|EMBL:AED92405.1}
trEMBLtr|M0U668|M0U668_MUSAM5.00E-104Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP04060_001}
TAIRAT4G355805.00E-68NAC transcription factor-like 9

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000111977414985654-
Transcript Sequence

Network for GWHGAAEX001654

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.14NAM101392.50E-34
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms38.070
SRR2545915Juvenile tuber43.520
SRP108465SRR5643513five period of Gastrodia elata49.050
SRR5643514five period of Gastrodia elata31.590
SRR5643515five period of Gastrodia elata29.570
SRR5643524five period of Gastrodia elata29.820
SRR5643525five period of Gastrodia elata166.580
SRR5643528five period of Gastrodia elata96.040
SRR5643658five period of Gastrodia elata156.730
SRR5643659five period of Gastrodia elata18.790
SRR5643660five period of Gastrodia elata13.330
SRR5643661five period of Gastrodia elata18.110
SRR5643662five period of Gastrodia elata17.770
SRR5643663five period of Gastrodia elata16.100
SRR5643664five period of Gastrodia elata16.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.060
SRR6049655Rhizomagastrodiae_C368-T10_good_126.950
SRR6049656Rhizomagastrodiae_C368-T07_good_128.960
SRR6049657Rhizomagastrodiae_C368-T07_good_128.930
SRR6049658Rhizomagastrodiae_C368-T04_good_122.400
SRR6049659Rhizomagastrodiae_C368-T04_good_120.540
SRR6049660Rhizomagastrodiae_C368-T01_good_124.370
SRR6049661Rhizomagastrodiae_C368-T04_good_120.330
SRR6049662Rhizomagastrodiae_C368-T01_good_123.650
SRR6049663Rhizomagastrodiae_C368-T01_good_122.170
SRR6049664Rhizomagastrodiae_C368-T10_good_131.370
SRR6049665Rhizomagastrodiae_C368-T10_good_131.370
SRP279888GastroGastrodia elata tuber 21.37
JuvenJuvenile tuber34.22
Mother_GastroMother tuber of Gastrodia elata 50.13
Mother_JuvenMother tuber of Juvenile 45.36