Detail information of GWHGAAEX001655/evm.TU.scaffold_111.26


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG08961.00E-94Ubiquitin-conjugating enzyme E2
nrgi|720022115|ref|XP_010262943.1|1.89E-97PREDICTED: ubiquitin-conjugating enzyme E2 variant 1C [Nelumbo nucifera]
Swissprottr|Q9SJ44|UEV1C_ARATH3.00E-95Ubiquitin-conjugating enzyme E2 variant 1C
trEMBLtr|A5BID6|A5BID6_VITVI2.00E-96Putative uncharacterized protein {ECO:0000313|EMBL:CAN76921.1}
TAIRAT2G360601.00E-94MMS ZWEI homologue 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011110706171086563-
Transcript Sequence

Network for GWHGAAEX001655

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00179.25UQ_con441377.60E-16
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUBC

KEGG pathway

KO Enzyme pathway mapID
K10704UBE2V Toll and Imd signaling pathway map04624

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms144.270
SRR2545915Juvenile tuber165.320
SRP108465SRR5643513five period of Gastrodia elata246.920
SRR5643514five period of Gastrodia elata278.210
SRR5643515five period of Gastrodia elata224.010
SRR5643524five period of Gastrodia elata252.880
SRR5643525five period of Gastrodia elata418.830
SRR5643528five period of Gastrodia elata378.720
SRR5643658five period of Gastrodia elata440.510
SRR5643659five period of Gastrodia elata205.020
SRR5643660five period of Gastrodia elata260.930
SRR5643661five period of Gastrodia elata258.330
SRR5643662five period of Gastrodia elata263.920
SRR5643663five period of Gastrodia elata251.670
SRR5643664five period of Gastrodia elata279.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1246.940
SRR6049655Rhizomagastrodiae_C368-T10_good_1472.670
SRR6049656Rhizomagastrodiae_C368-T07_good_1247.520
SRR6049657Rhizomagastrodiae_C368-T07_good_1259.150
SRR6049658Rhizomagastrodiae_C368-T04_good_1274.240
SRR6049659Rhizomagastrodiae_C368-T04_good_1266.000
SRR6049660Rhizomagastrodiae_C368-T01_good_1250.680
SRR6049661Rhizomagastrodiae_C368-T04_good_1253.340
SRR6049662Rhizomagastrodiae_C368-T01_good_1264.470
SRR6049663Rhizomagastrodiae_C368-T01_good_1285.290
SRR6049664Rhizomagastrodiae_C368-T10_good_1344.670
SRR6049665Rhizomagastrodiae_C368-T10_good_1344.670
SRP279888GastroGastrodia elata tuber 392.03
JuvenJuvenile tuber285.38
Mother_GastroMother tuber of Gastrodia elata 225.83
Mother_JuvenMother tuber of Juvenile 208.79