Gene detail

Database	Orthologs	E value	Annotation
nr	gi\|695041017\|ref\|XP_009408105.1\|	3.52E-60	PREDICTED: protein LSD1 isoform X1 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q0J7V9\|LSD1_ORYSJ	3.00E-60	Protein LSD1
trEMBL	tr\|M0TER1\|M0TER1_MUSAM	1.00E-60	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr7P04710_001}
TAIR	AT1G32540	2.00E-35	lsd one like 1

Scaffold	Start	End	Strand
GWHAAEX00000111	1355886	1358317	+

Transcript Sequence
>GWHTAAEX001660 CACTCACACACTCTATCACTCCTCTATTTTTTAGAAGTTTGCCCATCCTATTCTTGTTCAAGAATACTTAATTACAGAGTTCTTATATGATTCGATGTAGTAGTACTGGTTTGATGTAGTCCAGTAGTTGAGGATCAGAATTTGTTGTCTCAGATCATGAGTTCAAATCCCACTAATCACATAATGCGACCGTCTCTCTCGCAGCATAATGGTGGTCAGAGTCATCTTGTTTGCTCAGGATGTAGAAATCTTCTTCAGTATCCATTAGGGGCAGCATCAGTCTATTGTGCTGTCTGCCATGTAATGACAAATGTTCCTCCGCCTGGAACAGAGATGGCTCAGCTAGTCTGCGGAGGCTGCCACACGCTCCTGCAGTACATACGTGGAGCAACGGGCGTGCACTGCACATGCTGCCACATGATTAGCCTAGCACTCGAAGCAAATCAGATTGCGCATGTGGGCTGCGAGAATTGCGGCACACTATTGATGTATCCATATGGAGCCAGATCCGTAAAATGCGCAATTTGCAATTTTGTGACAACGATCGGGACCACGCCAAGCCAGCAAGAGAAGCTCATTTAAACTTCTGCTGAGAGCATCACTTCAAATCATTCTCCTAATTATATATGTGGCATATATGGAGAATTATTATTACAAGAACAATGTGTTTATTTGTATTAATATTTCTATTTCTCCTATTATGAATCACTTAGTAGTGTTTATTTGCCTACTCTTTCAATTTTATTTTCGGTGCGTCGATGAAATCATATTATAGGAGTTGTAAATCATGCCGACGACACGTTCTGATATCGGTCATCAGACGACATTATACTGGATACTTTGAATGCGCAACTGTGTCGACAAGCTCCGACTCCGAAGGTTCCCGAGCTTTTTTTGTTTCTTCCTCCCTATGCAAACTTGAGAGTTTTTGGAAGACTAAAAAGATAGTTTGGAGTTGGTTGTGCCATTGAGATTAGTTTGCTTAAATTTATGATTTCCCCATAAGTAATCGCATCTCTTCCTCAAGTTATATCTTAAATTCGTATTATATCGAGAACATTTATATTTTTTCCTCTACTTTCTTGTTCTCTTATTTCGAATTATGAAATCAATCAATCTTATGTTAAACATAAGAACATTGCAAACTCACCC

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF06943.11	zf-LSD1	26	49	9.80E-10
PF06943.11	zf-LSD1	65	89	1.70E-09
PF06943.11	zf-LSD1	103	127	3.40E-14

Protein Sequence

Gene family	subfamily
Transcription Factors Family	C2C2-LSD

KO	Enzyme	pathway	mapID
--	--	--	--

GO term	Ontology	Name

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.000
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	3.090
	SRR5643514	five period of Gastrodia elata	4.850
	SRR5643515	five period of Gastrodia elata	7.860
	SRR5643524	five period of Gastrodia elata	2.550
	SRR5643525	five period of Gastrodia elata	2.730
	SRR5643528	five period of Gastrodia elata	2.740
	SRR5643658	five period of Gastrodia elata	1.660
	SRR5643659	five period of Gastrodia elata	0.610
	SRR5643660	five period of Gastrodia elata	0.000
	SRR5643661	five period of Gastrodia elata	0.610
	SRR5643662	five period of Gastrodia elata	0.070
	SRR5643663	five period of Gastrodia elata	0.310
	SRR5643664	five period of Gastrodia elata	0.310
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.260
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.420
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.220
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.000
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.220
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	2.580
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.050
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.390
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.390
SRP279888	Gastro	Gastrodia elata tuber	0.47
	Juven	Juvenile tuber	0.91
	Mother_Gastro	Mother tuber of Gastrodia elata	0.00
	Mother_Juven	Mother tuber of Juvenile	0.03