Detail information of GWHGAAEX001663/evm.TU.scaffold_111.38
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|221633293|ref|YP_002522518.1| | 1.00E-14 | hypothetical protein trd_1313 [Thermomicrobium roseum DSM 5159] |
| nr | gi|720061803|ref|XP_010275290.1| | 0 | PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nelumbo nucifera] |
| Swissprot | tr|Q944A7|Y4523_ARATH | 0 | Probable serine/threonine-protein kinase At4g35230 |
| trEMBL | tr|M0SN90|M0SN90_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P12250_001} |
| TAIR | AT5G46570 | 0 | BR-signaling kinase 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000111 | 1435089 | 1458896 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX001663
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 70 | 305 | 8.10E-26 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-XII-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K14500 | BSK | Plant hormone signal transduction | map04075 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005515 | Molecular Function | protein binding |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 53.230 |
| SRR2545915 | Juvenile tuber | 39.410 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 32.680 |
| SRR5643514 | five period of Gastrodia elata | 35.610 | |
| SRR5643515 | five period of Gastrodia elata | 27.510 | |
| SRR5643524 | five period of Gastrodia elata | 32.620 | |
| SRR5643525 | five period of Gastrodia elata | 22.700 | |
| SRR5643528 | five period of Gastrodia elata | 16.200 | |
| SRR5643658 | five period of Gastrodia elata | 20.520 | |
| SRR5643659 | five period of Gastrodia elata | 48.580 | |
| SRR5643660 | five period of Gastrodia elata | 51.470 | |
| SRR5643661 | five period of Gastrodia elata | 50.250 | |
| SRR5643662 | five period of Gastrodia elata | 40.620 | |
| SRR5643663 | five period of Gastrodia elata | 43.550 | |
| SRR5643664 | five period of Gastrodia elata | 41.570 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 41.960 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 35.010 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 34.450 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 47.470 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 29.950 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 24.330 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 44.040 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 33.330 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 37.420 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 34.240 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 32.890 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 32.890 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 40.04 |
| Juven | Juvenile tuber | 67.85 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 8.07 | |
| Mother_Juven | Mother tuber of Juvenile | 25.54 |