Detail information of GWHGAAEX001665/evm.TU.scaffold_111.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|521462566|ref|YP_008149431.1|7.00E-28hypothetical protein SCE1572_14985 [Sorangium cellulosum So0157-2]
KOGKOG12370H+/oligopeptide symporter
nrgi|694996655|ref|XP_009395136.1|0PREDICTED: protein NRT1/ PTR FAMILY 7.3-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9LQL2|PTR14_ARATH0Protein NRT1/ PTR FAMILY 7.3
trEMBLtr|M5X5R2|M5X5R2_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ21397.1}
TAIRAT1G324500nitrate transporter 1.5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011115420401547815-
Transcript Sequence

Network for GWHGAAEX001665

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00854.20PTR21295361.80E-90
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0022857Molecular Functiontransmembrane transporter activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.880
SRR2545915Juvenile tuber7.360
SRP108465SRR5643513five period of Gastrodia elata91.680
SRR5643514five period of Gastrodia elata56.440
SRR5643515five period of Gastrodia elata35.840
SRR5643524five period of Gastrodia elata53.280
SRR5643525five period of Gastrodia elata6.330
SRR5643528five period of Gastrodia elata5.900
SRR5643658five period of Gastrodia elata6.890
SRR5643659five period of Gastrodia elata20.980
SRR5643660five period of Gastrodia elata22.820
SRR5643661five period of Gastrodia elata19.180
SRR5643662five period of Gastrodia elata19.520
SRR5643663five period of Gastrodia elata15.110
SRR5643664five period of Gastrodia elata17.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_147.580
SRR6049655Rhizomagastrodiae_C368-T10_good_146.020
SRR6049656Rhizomagastrodiae_C368-T07_good_152.590
SRR6049657Rhizomagastrodiae_C368-T07_good_137.470
SRR6049658Rhizomagastrodiae_C368-T04_good_132.860
SRR6049659Rhizomagastrodiae_C368-T04_good_126.770
SRR6049660Rhizomagastrodiae_C368-T01_good_127.270
SRR6049661Rhizomagastrodiae_C368-T04_good_126.610
SRR6049662Rhizomagastrodiae_C368-T01_good_152.660
SRR6049663Rhizomagastrodiae_C368-T01_good_136.100
SRR6049664Rhizomagastrodiae_C368-T10_good_179.760
SRR6049665Rhizomagastrodiae_C368-T10_good_179.760
SRP279888GastroGastrodia elata tuber 9.01
JuvenJuvenile tuber27.51
Mother_GastroMother tuber of Gastrodia elata 25.46
Mother_JuvenMother tuber of Juvenile 17.73