Detail information of GWHGAAEX001667/evm.TU.scaffold_111.47


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG07063.00E-155Predicted GTPase-activating protein
nrgi|743778984|ref|XP_010919956.1|0PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD8 [Elaeis guineensis]
Swissprottr|Q8H100|AGD8_ARATH9.00E-159Probable ADP-ribosylation factor GTPase-activating protein AGD8
trEMBLtr|D7TTW7|D7TTW7_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI33882.3}
TAIRAT4G17890_13.00E-155Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011117539641772984-
Transcript Sequence

Network for GWHGAAEX001667

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01412.17ArfGap101109.30E-33
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12493ARFGAP2_3 Endocytosis map04144

Gene Ontology

GO term OntologyName
GO:0005096Molecular FunctionGTPase activator activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms50.560
SRR2545915Juvenile tuber63.420
SRP108465SRR5643513five period of Gastrodia elata48.630
SRR5643514five period of Gastrodia elata52.000
SRR5643515five period of Gastrodia elata56.260
SRR5643524five period of Gastrodia elata58.780
SRR5643525five period of Gastrodia elata39.720
SRR5643528five period of Gastrodia elata52.540
SRR5643658five period of Gastrodia elata45.790
SRR5643659five period of Gastrodia elata60.040
SRR5643660five period of Gastrodia elata56.350
SRR5643661five period of Gastrodia elata61.120
SRR5643662five period of Gastrodia elata62.790
SRR5643663five period of Gastrodia elata54.670
SRR5643664five period of Gastrodia elata52.420
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_151.730
SRR6049655Rhizomagastrodiae_C368-T10_good_161.960
SRR6049656Rhizomagastrodiae_C368-T07_good_157.410
SRR6049657Rhizomagastrodiae_C368-T07_good_151.490
SRR6049658Rhizomagastrodiae_C368-T04_good_150.520
SRR6049659Rhizomagastrodiae_C368-T04_good_155.070
SRR6049660Rhizomagastrodiae_C368-T01_good_146.550
SRR6049661Rhizomagastrodiae_C368-T04_good_152.500
SRR6049662Rhizomagastrodiae_C368-T01_good_160.620
SRR6049663Rhizomagastrodiae_C368-T01_good_161.820
SRR6049664Rhizomagastrodiae_C368-T10_good_166.790
SRR6049665Rhizomagastrodiae_C368-T10_good_166.790
SRP279888GastroGastrodia elata tuber 75.77
JuvenJuvenile tuber98.36
Mother_GastroMother tuber of Gastrodia elata 69.15
Mother_JuvenMother tuber of Juvenile 99.12