Gene detail

Detail information of GWHGAAEX001674/evm.TU.scaffold_111.54

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|305662890\|ref\|YP_003859178.1\|	8.00E-29	50S ribosomal protein S18 alanine acetyltransferase [Ignisphaera aggregans DSM 17230]
KOG	KOG3235	3.00E-98	Subunit of the major N alpha-acetyltransferase
nr	gi\|303386988\|gb\|ADM15470.1\|	2.12E-106	arrest defective 1 [Hordeum vulgare]
trEMBL	tr\|M0WAP6\|M0WAP6_HORVD	4.00E-107	Uncharacterized protein {ECO:0000313\|EnsemblPlants:MLOC_4672.1, ECO:0000313\|EnsemblPlants:MLOC_4672.2}
TAIR	AT5G13780	3.00E-98	Acyl-CoA N-acyltransferases (NAT) superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000111	2013931	2014854	-

Transcript Sequence
>GWHTAAEX001674 CATCACTGTTCATAGCATCTCCGGCATTCCGCGGGATTAAAGCGACAGCCCTAGCCATGGTTTGCATCCGGCAGGCCACGATGGACGACCTCCTGGCGATGCAGGCCTGCAATCTGATGTGCCTTCCTGAGAACTACCAGATGAAATACTACTTCTATCACATACTTTCATGGCCGCAACTTCTCTTCGTCGCAGAGGATTACGGCGGCAAGATCGTCGGCTATGTTCTTGCCAAGATGGAGGAGGAGCCATCGGAGCCTTGCCATGGCCACATCACCTCACTCGCTGTCCTCCGCACCCACCGCAAGCTCGGCCTCGCCACCAAGCTCATGAACGCCGCACAGAACGCCATGGGGGGAGTCTTCGGCGCTGAGTACGTATCGCTGCACGTTCGCCGCAGTAATCGCGCTGCTTTTAATCTTTATGCTTCCACCCTCGGATACAAGATCCATGATTTGGAGGCGAAGTACTATGCTGATGGGGAAGACGCGTATGACATGAGGAAGCAGCTTAAGGGAAGGCAGCAGCAGCAGTCCATTGCCCGTGGCCATCATCACCATCACCATCACGGCGGAGGGTGCTGCTCGGGGGACGATAAGCCGGCTGTTGATGCCACTGGAGTCGCTTTATCTCCCTCAGAGGTCAAAAGTTCTTCTACGGAGAACAAAGGTGAATAGTTGATGAGCCATTTATTTTGCTTTTAATATAGTTGTGCTCTGTTCTGTGATGAACTCTTGGTTTTGAATAGCTCTGCTGAGAATTATTTTTTATTTTTGGAGATTGAATAATATCTTGAACCTGTTTTGTGTTTGTCTTTTTAGTGGTTTGATTTTGTATATTAAAACTCACTTTGGTATGGATATTATTTTATATTTTGTTGCCTTTTTTCCTCTATTGAAGTTACTGAAAGTGTTAATATAAAAT

Network for GWHGAAEX001674

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00583.24	Acetyltransf_1	39	129	7.00E-14

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	GNAT

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008080	Molecular Function	N-acetyltransferase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	217.720
SRP064423	SRR2545915	Juvenile tuber	155.320
SRP108465	SRR5643513	five period of Gastrodia elata	127.460
	SRR5643514	five period of Gastrodia elata	112.970
	SRR5643515	five period of Gastrodia elata	111.560
	SRR5643524	five period of Gastrodia elata	109.950
	SRR5643525	five period of Gastrodia elata	158.850
	SRR5643528	five period of Gastrodia elata	132.580
	SRR5643658	five period of Gastrodia elata	141.050
	SRR5643659	five period of Gastrodia elata	110.670
	SRR5643660	five period of Gastrodia elata	132.320
	SRR5643661	five period of Gastrodia elata	123.880
	SRR5643662	five period of Gastrodia elata	127.210
	SRR5643663	five period of Gastrodia elata	122.550
	SRR5643664	five period of Gastrodia elata	147.950
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	134.260
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	228.460
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	133.390
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	136.380
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	108.460
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	111.500
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	119.530
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	103.150
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	105.840
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	117.360
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	158.690
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	158.690
SRP279888	Gastro	Gastrodia elata tuber	129.19
	Juven	Juvenile tuber	120.42
	Mother_Gastro	Mother tuber of Gastrodia elata	107.52
	Mother_Juven	Mother tuber of Juvenile	116.52