Gene detail

Detail information of GWHGAAEX001677/evm.TU.scaffold_111.58

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0243	0	Kinesin-like protein
nr	gi\|672113295\|ref\|XP_008810282.1\|	0	PREDICTED: kinesin heavy chain [Phoenix dactylifera]
Swissprot	tr\|Q07970\|ATK1_ARATH	2.00E-33	Kinesin-1
trEMBL	tr\|M0TD99\|M0TD99_MUSAM	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR	AT4G14330	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000111	2087445	2092918	-

Transcript Sequence
>GWHTAAEX001677 AGAAAATCTCCTCCCCCTCTCTCAAAAACCCTAATCAAAGCATTTCGCAATGGCTCCCACCCCCGTAAAAACCCCTCAATCGAAGCAGCGCCTAAATTTCTCCAACCCCAAAACAGAGCACCCCGTCGAAGTAATCGGCCGAATACGCAGTCTTCCCGAGCGCAACTTCAAGCCCTCGCCTTCACCCGCCCTCGAAATCTCTGGCAATGGCCGATCCCTCCGCCTTCGCTCCGACTCCGGCTACAGAGATTTCATTCTCGACGGCGTTTCGCTCTCAGAAAGCGAGAGCCTTGAGGCCTTCTACGAGCGATTTGTGGAACCGAGGATCGCCGGAGTGCGCTCCGGCGGCAAATGCACCGTCATGATGTACGGTCCCACCGGCGCCGGAAAGAGCCACACCATGTTCGGCTCCTCTGCAGAACCCGGCATTGTTTATAGGGCGCTTAAGGGCATTCTTGGCGAAGGAGAAGGTGATCTAGGGTTAGGGATTCCTCTGTTCGCGCAAGTCGCTGTTTTGGAGATTTATAATGAGGAGATTTATGATCTTCTTCTTAGTGGCAACTGCGCCCAGGCTAACAAGGGAAGCACTCCCAAGGCAAGACTGGAAGTGATGGGAAGAAAGGCGAAGAATGCATCATATATATGTGGAAATGAAGCTGGAAAATTGTCAAGAGAAATAGCAAAGGTGGAGAAACGCAGGATTATTAAAAACACATTGTTGAATGAAAGAAGCTCTAGAAGCCATTGTGTGATAATCTTGGATGTTCCATCTGTAGGTGGAAGGCTTATGCTTGTTGACATGGCTGGCTCTGAGAATATAGAGCAAGCAGGCCAAGCTGGATTTGAGGCAAAGATTCAGACAGCAAAAATCAATCAAGGAAACATAGCACTGAAGAGAGTAGTTGAGTCCATAGCCAATGGAGATTCCCACGTTCCTTTCAGAGATAGCAAGCTAACAATGCTGCTTCAGGATTCTTTTGAGGATGAAAATTCTAAAATTCTCATGATTCTTTGTGCAAGTCCTGATCCCAAAGAGATGCACAAAACTATTGCAACTCTTGAATATGGGGCAAAGGCGAAATGCATCGTCCGCGTTGCTCACATGCCCACTCCCAGAGACAAGCTATGCGGCGAAGATTCTTCGCCGCTACTAAGATCAAGAATTGTAGCAATGAACCAATTCATTTACAAGTTGCAAATGGAGAACAAGGTAAAAGACAAGGAATGCGATAAGGCGCGTAGAGACCTTTTGTGCAAAGAGGAAGAAATATTGCAACTTCGGTCGAAGATCCATCTCATTGAAGGAAGGCCGGCGGCGGCTGTAAAAGAAGAGGAGATCAGGTGCGTGGTTGATGAAAGGACTCGAGCATTGAGAATCGAGCTGAGGAAAATGGAGGAGAAGGTGCATCAACAACAAGAGGAACTCTACTCTTTACGCAAGCGATTGGAAGAAAGGGAATCTATTAATTGTGCAGCAGACGACGACAACGAGGCACTGTATTTGCATGATGGCAATGGTGGGAAATTCTTAAAACGGCTGGCCGAAATTTGCCCCGAGGATCAAGGAATGGAGAAGTCAATGGATTTAGATTTGGGTGATCAAGAAGAGCCTGAGACTCGCATTCATGATGTGAGGGAAATAAAAAAAGAAATGCAACATAATTCTCTTAATTCATGTGTACAAGAGAATAACATTTGTTTCGGTATGCCTAAGTTTCCGGAAAAGTTGTGCTTGAGCACTGTGTTTGAGAGGGATGATGAAGGGGAGGATAGAGATGGCATGGAGGAAGAAGTTGATAAAGAGGTTGTGGAGTGCATCGAACATAAATTTGCCTCTTTATCAAAGCACCAAACTGAAGATTTTGATATGCTACTTGGTTTAGAAGATGGAAAGGATTCAGATTCTACTAGAAGAACAAGAATACAAAATATCTTCAGGCTTTGCGGAAACCACAGAGAATTAGCACAGCATGTTGCAGTTCCAACTCCCATAAAAAGGAAATTAGAAGATGCAAGTTTTCATTCATTACCTTTATCACAAAATAAGGAGTTGTTTGTCTCTTCTTCACTTATTCCACCATTGCCTAAAATCCCAGTTGTAGATGGCAGCCAACAGGAGCTGAAAGAGAACAAAGAACCTGCAGGAGTCGAGCCGGCCAATATGATGAATGTTTACGTAAAATGGGAGGCATCTAAGGAGTTTTCTGGAAATATGATCAGAAAGATGCTGGTAATGAAGAGCTCTACCCTCAGTGATCTGAGGAAGCTAATTGAAATCCATCTTGAGGAAATCAACAACAAACAGCCATTCACTTTTCTCATGCTCGCAGATCCGCTGGGAGCTCCCGTGCCAGTAGAGAAGGAAGATGCTATATTAGTTAGCAAGTTGCCTGCTTGCAACGGTCAGCAGAACACTCATCTCGCCTGTTTGCGTCCTGCAAGAAGAAGCACTGCTCAATGGCAAAATCACACTCCATTCAGTTCGCTGGAGAACACTCTTCTTCCACTTCAAGAAATGAAGACATCACCATGATAGCACAATAGGAAGCTTCAAAAATGTCCTTTTTTTTCTTCATCCTCTTCTGACTAGTCATTTGTAAATTTGAGCTTGAAGAAGATATTTTTGCATCATATCTCGGCATTTGCTTTGAGAGTGTTTCTCAAGAGATATGCTTCTCTTTTGTGCTTTGGAATCT

Network for GWHGAAEX001677

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.22	Kinesin	66	346	2.90E-57

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007018	Biological Process	microtubule-based movement
GO:0008017	Molecular Function	microtubule binding
GO:0005524	Molecular Function	ATP binding
GO:0003777	Molecular Function	microtubule motor activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.470
SRP064423	SRR2545915	Juvenile tuber	1.400
SRP108465	SRR5643513	five period of Gastrodia elata	1.190
	SRR5643514	five period of Gastrodia elata	1.240
	SRR5643515	five period of Gastrodia elata	0.870
	SRR5643524	five period of Gastrodia elata	1.180
	SRR5643525	five period of Gastrodia elata	0.460
	SRR5643528	five period of Gastrodia elata	0.910
	SRR5643658	five period of Gastrodia elata	0.240
	SRR5643659	five period of Gastrodia elata	0.070
	SRR5643660	five period of Gastrodia elata	0.400
	SRR5643661	five period of Gastrodia elata	0.360
	SRR5643662	five period of Gastrodia elata	0.200
	SRR5643663	five period of Gastrodia elata	0.210
	SRR5643664	five period of Gastrodia elata	0.330
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.760
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.490
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.650
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.190
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.560
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.660
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.670
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.150
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.740
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.810
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.950
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.950
SRP279888	Gastro	Gastrodia elata tuber	0.76
	Juven	Juvenile tuber	4.24
	Mother_Gastro	Mother tuber of Gastrodia elata	3.91
	Mother_Juven	Mother tuber of Juvenile	6.94