Detail information of GWHGAAEX001689/evm.TU.scaffold_111.70


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|313677023|ref|YP_004055019.1|1.00E-36short-chain dehydrogenase/reductase sdr [Marivirga tractuosa DSM 4126]
KOGKOG12086.00E-171Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
nrgi|568881051|ref|XP_006493406.1|0PREDICTED: retinol dehydrogenase 11-like [Citrus sinensis]
Swissprottr|A2RVM0|TIC32_ARATH5.00E-34Short-chain dehydrogenase TIC 32, chloroplastic
trEMBLtr|V4TMM2|V4TMM2_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR54642.1}
TAIRAT4G277606.00E-171NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011123453432360765+
Transcript Sequence

Network for GWHGAAEX001689

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00106.24adh_short592062.40E-23
PF00106.24adh_short2162691.00E-06
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.440
SRR2545915Juvenile tuber8.750
SRP108465SRR5643513five period of Gastrodia elata11.330
SRR5643514five period of Gastrodia elata11.310
SRR5643515five period of Gastrodia elata14.150
SRR5643524five period of Gastrodia elata11.660
SRR5643525five period of Gastrodia elata13.010
SRR5643528five period of Gastrodia elata15.420
SRR5643658five period of Gastrodia elata12.730
SRR5643659five period of Gastrodia elata15.790
SRR5643660five period of Gastrodia elata18.120
SRR5643661five period of Gastrodia elata14.940
SRR5643662five period of Gastrodia elata15.810
SRR5643663five period of Gastrodia elata15.590
SRR5643664five period of Gastrodia elata12.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.410
SRR6049655Rhizomagastrodiae_C368-T10_good_16.700
SRR6049656Rhizomagastrodiae_C368-T07_good_112.190
SRR6049657Rhizomagastrodiae_C368-T07_good_19.480
SRR6049658Rhizomagastrodiae_C368-T04_good_19.200
SRR6049659Rhizomagastrodiae_C368-T04_good_17.980
SRR6049660Rhizomagastrodiae_C368-T01_good_18.310
SRR6049661Rhizomagastrodiae_C368-T04_good_110.360
SRR6049662Rhizomagastrodiae_C368-T01_good_112.890
SRR6049663Rhizomagastrodiae_C368-T01_good_19.630
SRR6049664Rhizomagastrodiae_C368-T10_good_112.200
SRR6049665Rhizomagastrodiae_C368-T10_good_112.200
SRP279888GastroGastrodia elata tuber 12.65
JuvenJuvenile tuber9.55
Mother_GastroMother tuber of Gastrodia elata 6.14
Mother_JuvenMother tuber of Juvenile 5.80