Detail information of GWHGAAEX001693/CADD00165.1.gene


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|629088395|gb|KCW54648.1|1.89E-21hypothetical protein EUGRSUZ_I00598, partial [Eucalyptus grandis]
Swissprottr|Q94JY4|BRK1_ARATH9.00E-23Protein BRICK 1
trEMBLtr|A0A059ALB8|A0A059ALB8_EUCGR7.00E-22Uncharacterized protein {ECO:0000313|EMBL:KCW54648.1} (Fragment)
TAIRAT2G226408.00E-21BRICK1, putative

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011124102442411021+
Transcript Sequence

Network for GWHGAAEX001693

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K05752C3ORF10, HSPC300 Regulation of actin cytoskeleton map04810

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.570
SRR2545915Juvenile tuber9.900
SRP108465SRR5643513five period of Gastrodia elata6.970
SRR5643514five period of Gastrodia elata5.250
SRR5643515five period of Gastrodia elata5.130
SRR5643524five period of Gastrodia elata4.160
SRR5643525five period of Gastrodia elata7.880
SRR5643528five period of Gastrodia elata7.060
SRR5643658five period of Gastrodia elata5.770
SRR5643659five period of Gastrodia elata6.710
SRR5643660five period of Gastrodia elata7.490
SRR5643661five period of Gastrodia elata8.250
SRR5643662five period of Gastrodia elata8.730
SRR5643663five period of Gastrodia elata8.390
SRR5643664five period of Gastrodia elata6.240
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.960
SRR6049655Rhizomagastrodiae_C368-T10_good_13.130
SRR6049656Rhizomagastrodiae_C368-T07_good_14.660
SRR6049657Rhizomagastrodiae_C368-T07_good_15.160
SRR6049658Rhizomagastrodiae_C368-T04_good_14.170
SRR6049659Rhizomagastrodiae_C368-T04_good_15.210
SRR6049660Rhizomagastrodiae_C368-T01_good_12.630
SRR6049661Rhizomagastrodiae_C368-T04_good_14.070
SRR6049662Rhizomagastrodiae_C368-T01_good_15.160
SRR6049663Rhizomagastrodiae_C368-T01_good_13.840
SRR6049664Rhizomagastrodiae_C368-T10_good_13.890
SRR6049665Rhizomagastrodiae_C368-T10_good_13.890
SRP279888GastroGastrodia elata tuber 9.99
JuvenJuvenile tuber6.93
Mother_GastroMother tuber of Gastrodia elata 19.52
Mother_JuvenMother tuber of Juvenile 12.83