Detail information of GWHGAAEX001696/evm.TU.scaffold_111.77


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG41972.00E-125FOG: PPR repeat
nrgi|743774700|ref|XP_010917712.1|0PREDICTED: pentatricopeptide repeat-containing protein At3g02650, mitochondrial-like [Elaeis guineensis]
Swissprottr|P0C896|PP209_ARATH2.00E-125Pentatricopeptide repeat-containing protein At3g02650, mitochondrial (Precursor)
trEMBLtr|M0TE78|M0TE78_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P02880_001}
TAIRAT3G02650_22.00E-125Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011124532632454975-
Transcript Sequence

Network for GWHGAAEX001696

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01535.19PPR2642940.048
PF01535.19PPR3713990.4
PF13041.5PPR_24044511.80E-15
PF13041.5PPR_24755202.90E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.890
SRR2545915Juvenile tuber25.690
SRP108465SRR5643513five period of Gastrodia elata11.980
SRR5643514five period of Gastrodia elata15.290
SRR5643515five period of Gastrodia elata13.800
SRR5643524five period of Gastrodia elata13.920
SRR5643525five period of Gastrodia elata12.400
SRR5643528five period of Gastrodia elata11.520
SRR5643658five period of Gastrodia elata13.590
SRR5643659five period of Gastrodia elata17.450
SRR5643660five period of Gastrodia elata19.620
SRR5643661five period of Gastrodia elata16.790
SRR5643662five period of Gastrodia elata16.540
SRR5643663five period of Gastrodia elata16.880
SRR5643664five period of Gastrodia elata14.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.140
SRR6049655Rhizomagastrodiae_C368-T10_good_115.730
SRR6049656Rhizomagastrodiae_C368-T07_good_120.200
SRR6049657Rhizomagastrodiae_C368-T07_good_121.450
SRR6049658Rhizomagastrodiae_C368-T04_good_123.710
SRR6049659Rhizomagastrodiae_C368-T04_good_126.950
SRR6049660Rhizomagastrodiae_C368-T01_good_124.010
SRR6049661Rhizomagastrodiae_C368-T04_good_123.540
SRR6049662Rhizomagastrodiae_C368-T01_good_123.320
SRR6049663Rhizomagastrodiae_C368-T01_good_123.830
SRR6049664Rhizomagastrodiae_C368-T10_good_120.060
SRR6049665Rhizomagastrodiae_C368-T10_good_120.060
SRP279888GastroGastrodia elata tuber 16.67
JuvenJuvenile tuber11.91
Mother_GastroMother tuber of Gastrodia elata 15.37
Mother_JuvenMother tuber of Juvenile 11.06