Detail information of GWHGAAEX001701/evm.TU.scaffold_111.84


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|225425118|ref|XP_002275179.1|3.84E-166PREDICTED: tobamovirus multiplication protein 3 [Vitis vinifera]
Swissprottr|Q9ZUM2|TOM3_ARATH1.00E-162Tobamovirus multiplication protein 3
trEMBLtr|D7TAG0|D7TAG0_VITVI1.00E-166Putative uncharacterized protein {ECO:0000313|EMBL:CBI27483.3}
TAIRAT1G145302.00E-147Protein of unknown function (DUF1084)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011125676542579722+
Transcript Sequence

Network for GWHGAAEX001701

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06454.10DUF1084232942.70E-138
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms49.960
SRR2545915Juvenile tuber42.890
SRP108465SRR5643513five period of Gastrodia elata47.510
SRR5643514five period of Gastrodia elata44.330
SRR5643515five period of Gastrodia elata47.240
SRR5643524five period of Gastrodia elata46.780
SRR5643525five period of Gastrodia elata96.480
SRR5643528five period of Gastrodia elata89.630
SRR5643658five period of Gastrodia elata103.280
SRR5643659five period of Gastrodia elata38.170
SRR5643660five period of Gastrodia elata37.190
SRR5643661five period of Gastrodia elata35.450
SRR5643662five period of Gastrodia elata37.090
SRR5643663five period of Gastrodia elata35.530
SRR5643664five period of Gastrodia elata33.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_144.420
SRR6049655Rhizomagastrodiae_C368-T10_good_157.780
SRR6049656Rhizomagastrodiae_C368-T07_good_147.490
SRR6049657Rhizomagastrodiae_C368-T07_good_147.250
SRR6049658Rhizomagastrodiae_C368-T04_good_153.880
SRR6049659Rhizomagastrodiae_C368-T04_good_149.110
SRR6049660Rhizomagastrodiae_C368-T01_good_153.050
SRR6049661Rhizomagastrodiae_C368-T04_good_141.870
SRR6049662Rhizomagastrodiae_C368-T01_good_141.220
SRR6049663Rhizomagastrodiae_C368-T01_good_141.600
SRR6049664Rhizomagastrodiae_C368-T10_good_157.430
SRR6049665Rhizomagastrodiae_C368-T10_good_157.430
SRP279888GastroGastrodia elata tuber 39.77
JuvenJuvenile tuber30.16
Mother_GastroMother tuber of Gastrodia elata 67.37
Mother_JuvenMother tuber of Juvenile 40.22