Gene detail

Database	Orthologs	E value	Annotation
KOG	KOG0168	6.00E-18	Putative ubiquitin fusion degradation protein
nr	gi\|743787826\|ref\|XP_010922508.1\|	6.37E-26	PREDICTED: E3 ubiquitin-protein ligase UPL4 [Elaeis guineensis]
Swissprot	tr\|Q6WWW4\|UPL3_ARATH	1.00E-18	E3 ubiquitin-protein ligase UPL3
trEMBL	tr\|M0SYE5\|M0SYE5_MUSAM	2.00E-25	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P14160_001}
TAIR	AT4G38610	6.00E-18	Unannotated protein

Scaffold	Start	End	Strand
GWHAAEX00000111	2586961	2599380	+

Transcript Sequence
>GWHTAAEX001702 ATGAATGCGCACGATCTCAGCCAGGAAGACGTACAGTGTATGTACGAGTCATTCGATCATTTGATCGAACGGTTATCAGGTCGAAGAGAAGATGACCGCACGATTAAAATAATGAGATATAACGGCTCTGATGCGGCCGCACTCATCGGGAGCCATTCGATCCTCTTTTCATCGTCCGACAGCAAACGAAATGAAGCCGATCGGTGTTTTAGATCAATCGCAGAGACGCTCACTACCGACGACAGAATTGTAGTCGATCTTGTCGACAACATCTTCATACACAGAACCATAGCCATGATTCTCTGCCGGTTGCGGGTATTCAGGTGCAGATCCCACTCGCATCACCCGATCGGAGTCGCCTTGATATTCTGCTGTCTCATTCGCCCACGGAATCCCATCTTCTTCGATCTGGAGACCGCCATGGATAGGGGTCGCAAGCGCCCTGAGATCGCCGATCAATTGCCCGCCGATAAGCGAGCGTGCAGCTCCTCCGAGTTCCGCGCTGCTGCCCCTGATGCCGCCGCCGCAGGCTCGTCTTTGTCCTCAGTTCTCGATGCCGACGACGCCGGGCCATCGGCTCTCAGACTGGCTTTGTCCACAGTTGCTAATGTGTGCAAGAAGCTTCCTTTGGATTGTTCTTATCTCATCCTTGAGGTTGTTCCTACATTGTGCAATGTTCTAAAATATGAAGACAGCAAGCTTGTAGAAACAGCTGTTACGTGCTTGATAAGGATAATCGACTGTTTCAGTAATTCTAGTGAGATACTTGATCAGCTTTGCAAGCATGGGATGATTGACGGAGCGTCAATCATTGTCGAACGACGGAGGAGTCGTTCGCTGTCGGAGCCGAACGCTGTCGAGGTGCTATCGTTCGTTGTTGGAGCGAAAGGGACTGATCATGTCAACAGCGTTCAAGCAAGAGGTTCGAGCAAGAGGTTCGCGTTGTTCACGTCGACAGGAGGAGTCGTTCGCGTCGACGGAGGAGTCGTTCACGTCGTTCGCACCGTTGGCGTCGTTCGCTGTCGACAGAAGGCGGCTACAGTACCGAGTGTAAATTCCAAACCCTAA

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
K10590	TRIP12	Ubiquitin mediated proteolysis	map04120

GO term	Ontology	Name

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.000
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	0.990
	SRR5643514	five period of Gastrodia elata	0.870
	SRR5643515	five period of Gastrodia elata	0.620
	SRR5643524	five period of Gastrodia elata	0.480
	SRR5643525	five period of Gastrodia elata	2.770
	SRR5643528	five period of Gastrodia elata	1.340
	SRR5643658	five period of Gastrodia elata	2.270
	SRR5643659	five period of Gastrodia elata	1.620
	SRR5643660	five period of Gastrodia elata	1.550
	SRR5643661	five period of Gastrodia elata	1.420
	SRR5643662	five period of Gastrodia elata	1.480
	SRR5643663	five period of Gastrodia elata	1.690
	SRR5643664	five period of Gastrodia elata	1.440
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.370
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.510
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.300
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.550
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.110
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.810
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.810
SRP279888	Gastro	Gastrodia elata tuber	0.72
	Juven	Juvenile tuber	0.89
	Mother_Gastro	Mother tuber of Gastrodia elata	0.54
	Mother_Juven	Mother tuber of Juvenile	1.09