Detail information of GWHGAAEX001705/evm.TU.scaffold_111.89


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743877210|ref|XP_010907835.1|2.06E-78PREDICTED: uncharacterized protein LOC105034391 [Elaeis guineensis]
trEMBLtr|M5XWU7|M5XWU7_PRUPE2.00E-67Uncharacterized protein {ECO:0000313|EMBL:EMJ23675.1}
TAIRAT3G075652.00E-45Protein of unknown function (DUF3755)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011126936892717349-
Transcript Sequence

Network for GWHGAAEX001705

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12579.7DUF37552312641.90E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.260
SRR2545915Juvenile tuber23.900
SRP108465SRR5643513five period of Gastrodia elata15.160
SRR5643514five period of Gastrodia elata14.950
SRR5643515five period of Gastrodia elata12.090
SRR5643524five period of Gastrodia elata13.170
SRR5643525five period of Gastrodia elata71.470
SRR5643528five period of Gastrodia elata25.630
SRR5643658five period of Gastrodia elata27.780
SRR5643659five period of Gastrodia elata16.910
SRR5643660five period of Gastrodia elata15.620
SRR5643661five period of Gastrodia elata17.460
SRR5643662five period of Gastrodia elata14.390
SRR5643663five period of Gastrodia elata17.600
SRR5643664five period of Gastrodia elata14.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.930
SRR6049655Rhizomagastrodiae_C368-T10_good_114.850
SRR6049656Rhizomagastrodiae_C368-T07_good_113.920
SRR6049657Rhizomagastrodiae_C368-T07_good_113.810
SRR6049658Rhizomagastrodiae_C368-T04_good_113.450
SRR6049659Rhizomagastrodiae_C368-T04_good_112.020
SRR6049660Rhizomagastrodiae_C368-T01_good_117.430
SRR6049661Rhizomagastrodiae_C368-T04_good_110.960
SRR6049662Rhizomagastrodiae_C368-T01_good_112.510
SRR6049663Rhizomagastrodiae_C368-T01_good_112.540
SRR6049664Rhizomagastrodiae_C368-T10_good_115.710
SRR6049665Rhizomagastrodiae_C368-T10_good_115.710
SRP279888GastroGastrodia elata tuber 26.46
JuvenJuvenile tuber14.84
Mother_GastroMother tuber of Gastrodia elata 6.97
Mother_JuvenMother tuber of Juvenile 7.75