Gene detail

Detail information of GWHGAAEX001707/evm.TU.scaffold_111.91

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG2215	2.00E-50	Exocyst complex subunit
nr	gi\|672131770\|ref\|XP_008789451.1\|	3.74E-171	PREDICTED: exocyst complex component EXO84A-like [Phoenix dactylifera]
Swissprot	tr\|F4I4B6\|EX84A_ARATH	9.00E-55	Exocyst complex component EXO84A
trEMBL	tr\|M5VYF7\|M5VYF7_PRUPE	2.00E-124	Uncharacterized protein {ECO:0000313\|EMBL:EMJ01998.1}
TAIR	AT5G49830	2.00E-50	exocyst complex component 84B

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000111	2770256	2796075	+

Transcript Sequence
>GWHTAAEX001707 TATACACATTTTAATTTGATTCGTCTCCTTGCCTTCAGCGGCTTGTAGCCCTGAACTAGCCTGTTTAGCCCATTTGAAATGGTCTCATCTTCCCCCTTTCTCTGCCGACCAGGTGAGGTCAGATACGAATCAGGCATGGTGGAAAGCGACGGTCGATTTCCTAAAGTTTCTTCGTCTCCGGCGAATTTCTTATTCCATTCCCTCTCAAAGCAGGCGATTCTCTTGCATTGGAGAGGACGGGGAGGTAAGTCATCGTTCATATCTTTTCATGGATTCTCCTTCATCCCGATTCGATGATCAAGAAGGGGATGAGTACCAATCAGCGGAGGAGGCCATGGAGTTCTCACCCGATTCGGACTCCGAAGGAGGTGATCTGGAACTGGATTCAATGACAGGAAAAGGCATAAATCGATTGTTCTCGGAGCTTCTTGAATTAAAAAAAACTTCGTATGAAGATTTTCAGAAAAATATTTATTCTAATTATTCGGCCTTTTTGGGGGTATTTGAAGAACTTGGGGACATAGAAAGTGAAATCACAAAAATGAAGAATCATGTTTCAACTCAAAAAATACTTGTTGGAGAGCTTATGAACAGCTTTCATTCAGAGATAATATTCAACAAATTGGCTAATGTGAAGGATGAATGTGTTGAAGATCTTGATTTAGATTGTCCAAGCTGGTTGGAGACTCGCATGCAAAATATTTTGGAAACGCTTGAAATTCTTATGTCTGAGCTCCGATTAGAAGAGGCTTTAGCTGTTTTGGAGAAGGAGACCCAAGCCTTGCAGAAGTTGCGGAAGGAAAAGGATGGGTTCTTTCAAACTATCAGTTCATTTGCATTGGCAATTTCTGATTGGAGAATTAGGCTTTCTGAACAGTTTACTTCATTAGCTAAACACAAGAGAGTGACCTGGCCAGAACTTCTTAACTTCTTATTTGGTCTCTGCAGGCTCGGTGATAGTGACCGTGCAAGTGCTTTGTTACTGAATTTCTTTCATTTGCAACTTGAAAGCAGTGTGAATGAGCTGGAGCGTTCAGCATCATTTCTTAATGGAATTCACATATTGGAACTTACAAAGGTTGTGTTCTCTACCATTTTTCAGGCAGCAAGGGGTTTTGTGATGTTGTTTGGGGTGGCGTCTCCATATACTTCAGATTTGATGCAGTGGGCTAGAGTAGAACTTGTATTGATTTATCGTAATTTTGACAAGTATGTTAAGTCATTTCCAGAAACAAGTTTTGCCTTAGATTTGGCAGCTGAAACTGTGAATATTTCTTTTTCATTTTGTTCATTATTGGAACATGAGGGTCTAAGCTTGCAGTCTGACTTGATTAAGCTGATGAAACCTTGCATATCAGAGGTGATGCGGATGCATTTTGATCAGTTGGGGAAAGTTGTTAGTTTACTGGCTTCTGCAGACAGCTGGGTTATGGGGGAATTTTCTATTTCGGAAAAAGTAAACAATAATTCTCTTTTGCAAGAAATCAAAGAAAAATCAGAATATCTCCAGCTTACAAGTAGTGGAAGAGAGTTTGTTACATTAATTCTGATGGTTTTTGATGACGCTTTTCCCTTCCAAGCTTTTCATGTGGAGAACATATTACTCAAAGGCCTCAACCACTTGTTTGATGAGTACATACTTAACCTTGAAAGTGATATAGCAAACAAAGGAAAAGAGTGTGATTTTTCTTTAACTACTGCAGCTCAGAAATTTCAGCAGCAAATTTCAATCGTTGTTGATTCATTTCTAATGGTGTATCTGTTGCCAACTATTGTACAAAATTCATTTAATTCCATAATATTTTCCAATGATGTGGCAGAACAAGATAAAGTTTCTTTGCAGAAAGAATTGGATCTTTGGAAGCAGGCAGTTCAAGAGGTCCCAGACCGAATAAAGTGTTGTTTCTGCGAGATATTTGTGTCTGGCATAATGAAATGTGGAAATTCTGAGTTCATTAAAGATCTGGACACGTGCAGTTGTCGCCATTGCATACCAGGTTCCTTAGAAGATCCAATGCCTTCTTTTGTTTTTCAGGAGCTGTTTGTGCTACTGAGTCATTTAGAGGAACATTTTGGATCTATTGTGCTCGGTAAAGATGGGATCATGAATAGCTTACTAAATGGGATTATGATAACTATGATTTTCTGGCTTTCAGAAAATTGGGAGTTCTTTGAAAGTACAAATAGCTATAAACAGTTGCTTTTAGATTTGCACTTCTTGATGGAGACAGCAAGGGTTGGAGGCTACTCCACGGATAATCTAGTGGTAGTAGCATTGGATTTAGTGTCTATTATTGAAAGGAAGCTGTCTACAGAAGAATTCCATAGGAGCAGTGAAGTTCCTGAAGAGGGATGGGCTTTAAATGCTGCTAAACTGGCAATCAAAACCCTTCTTCAAGCTGAAAAAACCAACAAAGAGTCTAAAGATAATGAAGATAACAATGAAGAAACTCAAGAATGGATGGATGGATCCAAGATAGATGGTGAGTATTCAATGGAGGAATCCTCCACAAGATTAAAGACTCAAAACAGCATTAGTCAACCCCTTCAAAATCTGATAACCGGTCCTGCGGATGACGACTCTGGCTATTATGGCAACGAGGGATCCATCGATAGTGACCGTCTGAGCAAGACTGTCAGCGTCGATGGACTCAACGACTATATAATAATCTCTGGAGAGGAATCCCAAACGGATTTCGATTTATCCCCAGCTGCAACTCTCAAAAGCGGCACAGCGGAGATTCAGCTGTTTGGAAGCCCAGGAAGAAGACATAGAAGTGGCGATGTGACCATTTTCGCTGTTTCCGACGAAGAAAGCTTTACTCACGTGTCTCCTCTTCCAGCCCTTCAGGCTAAGGCTGCAGAAGAGACCCGGCGCCGTTTAGGAGAAACCGAGGGCAGCATTTTGTATGAAGGCAGTAATGGGGAAGGCAATCAAGTGTCCAAAAGCAAGGTTCAGAGGCATGCCAAAGAGAGAGTATCTGCTAACAGGAGACAAGAGAGGCCTAAACATGTGAATGCTGACAAGGGTCTGGATAGATTCAACCATTCCAAGGGTACAGAAAGGATTAAGAAAAATGGTATGGCTGAAGATGACATGGGAAAGAACAAATATGGGAGAACTGCAAGAAGGCCTCAATGGCAATAAATAGCTTTGTATATTTGATACTAACAATTGAACACTTAATTTTATTTGGGCTATGTAATCTCATGTAGATAATTTAGGGCTTTTTTGAGGGCAATTTTATAGATTATTTTGTTGTTGACAAATTATCAAGTATAATATTTACAATAATGACAATTTGTAATTTATAAAATGGATCATCTATATGAATCTCCTTGTTTCTATTATGCA

Network for GWHGAAEX001707

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF08700.10	Vps51	43	104	1.50E-06

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	39.880
SRP064423	SRR2545915	Juvenile tuber	45.280
SRP108465	SRR5643513	five period of Gastrodia elata	19.290
	SRR5643514	five period of Gastrodia elata	22.850
	SRR5643515	five period of Gastrodia elata	22.160
	SRR5643524	five period of Gastrodia elata	23.830
	SRR5643525	five period of Gastrodia elata	35.190
	SRR5643528	five period of Gastrodia elata	34.680
	SRR5643658	five period of Gastrodia elata	37.440
	SRR5643659	five period of Gastrodia elata	15.050
	SRR5643660	five period of Gastrodia elata	15.270
	SRR5643661	five period of Gastrodia elata	14.210
	SRR5643662	five period of Gastrodia elata	12.850
	SRR5643663	five period of Gastrodia elata	15.370
	SRR5643664	five period of Gastrodia elata	14.170
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	18.940
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	20.960
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	19.980
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	17.140
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	17.640
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	20.540
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	18.550
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	16.380
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	18.750
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	19.930
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	22.110
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	22.110
SRP279888	Gastro	Gastrodia elata tuber	21.93
	Juven	Juvenile tuber	17.07
	Mother_Gastro	Mother tuber of Gastrodia elata	36.78
	Mother_Juven	Mother tuber of Juvenile	29.04