Detail information of GWHGAAEX001708/evm.TU.scaffold_111.92


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|325957956|ref|YP_004289422.1|3.00E-34universal diphthamide biosynthesis domain-containing protein [Methanobacterium sp. AL-21]
KOGKOG26481.00E-174Diphthamide biosynthesis protein
nrgi|743853659|ref|XP_010940709.1|0PREDICTED: diphthamide biosynthesis protein 1 [Elaeis guineensis]
trEMBLtr|A0A097PMA4|A0A097PMA4_9ASPA0Diphthamide synthesis DPH2 family protein {ECO:0000313|EMBL:AIU49148.1} (Fragment)
TAIRAT5G620301.00E-174diphthamide synthesis DPH2 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011127985132801580+
Transcript Sequence

Network for GWHGAAEX001708

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01866.16Diphthamide_syn823826.90E-104
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0017183Biological Processpeptidyl-diphthamide biosynthetic process from peptidyl-histidine

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.430
SRR2545915Juvenile tuber14.090
SRP108465SRR5643513five period of Gastrodia elata35.040
SRR5643514five period of Gastrodia elata32.680
SRR5643515five period of Gastrodia elata36.730
SRR5643524five period of Gastrodia elata33.190
SRR5643525five period of Gastrodia elata36.860
SRR5643528five period of Gastrodia elata32.880
SRR5643658five period of Gastrodia elata33.320
SRR5643659five period of Gastrodia elata46.060
SRR5643660five period of Gastrodia elata46.860
SRR5643661five period of Gastrodia elata48.840
SRR5643662five period of Gastrodia elata43.940
SRR5643663five period of Gastrodia elata39.150
SRR5643664five period of Gastrodia elata32.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.420
SRR6049655Rhizomagastrodiae_C368-T10_good_145.630
SRR6049656Rhizomagastrodiae_C368-T07_good_126.670
SRR6049657Rhizomagastrodiae_C368-T07_good_122.360
SRR6049658Rhizomagastrodiae_C368-T04_good_117.710
SRR6049659Rhizomagastrodiae_C368-T04_good_117.250
SRR6049660Rhizomagastrodiae_C368-T01_good_119.750
SRR6049661Rhizomagastrodiae_C368-T04_good_117.350
SRR6049662Rhizomagastrodiae_C368-T01_good_125.590
SRR6049663Rhizomagastrodiae_C368-T01_good_118.960
SRR6049664Rhizomagastrodiae_C368-T10_good_142.890
SRR6049665Rhizomagastrodiae_C368-T10_good_142.890
SRP279888GastroGastrodia elata tuber 32.21
JuvenJuvenile tuber43.61
Mother_GastroMother tuber of Gastrodia elata 33.90
Mother_JuvenMother tuber of Juvenile 38.00