Gene detail

Detail information of GWHGAAEX001710/evm.TU.scaffold_111.95

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|392404116\|ref\|YP_006440728.1\|	9.00E-43	2-octaprenylphenol hydroxylase [Turneriella parva DSM 21527]
KOG	KOG1236	0	Predicted unusual protein kinase
nr	gi\|743806185\|ref\|XP_010927618.1\|	0	PREDICTED: probable serine/threonine-protein kinase abkC isoform X2 [Elaeis guineensis]
Swissprot	tr\|Q9MA15\|Y1796_ARATH	4.00E-29	Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic (Precursor)
trEMBL	tr\|M0RMB2\|M0RMB2_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr10P28880_001}
TAIR	AT1G11390	0	Protein kinase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000111	2810952	2818822	-

Transcript Sequence
>GWHTAAEX001710 CGCCGAACCCAAACCCTATGCGAGCCGCTTTTTCCGATTCGTTTTCCCCTCTAAAGAAGCAGAAACCGCAATCTCTCATCTTCAAACCCTCGATCACAAGCTCGCTGGCCAATCTCATCCTTGGACGCTGACGTCTTCGACCTACCGGATTGAATTCAAGCTTCGATCGACATTCCGCAATCGCCATAGGATCTTCGTCTTCTCTGGTTTTCGGATTTTGATGCAATCATTGATCCCGTTGGGCGGGGCTAGCTACGATGGCTGCCCAAGGACTCCGGTGTTTTCATCTCCATCGCCTTGAATCCATTTCGCTTTGGAATTCACTGTAAACGTCTATACACTTGAATCCAACCATTCCGAGCTTTTAATTTCTTATTGGATTTGCGGGACTCTGCTCCTCTGAAGATTTATGATGTTAAGGCTTTTTGCTTTCAAAAGGGGAGTTAAACTTGATAATTCTTCTTTAGCAAGCAATAGGTGCGCGTACATTACAGGACAGTGCAATGAATCAGCAATTTCAATTGGTTTACGGTTACAATTTCCTTACAAAATTATTCATCGGCAAGGGCCTTTAGTCAGCGGAAACAACACCCCTGCAATGATTTTGATTGAACGGAATCTTCACAAACTTGTTAACTTGCCGTTGCCCTGCAAAAAATTCCAATGGAATCGAACTTTTAATATCAGAAACACATCACTTAGGAAAACTTTTGAGGAAAATCTTGCTAATCGCTGCACTGTCAAGAAGTACTCCACCTTCTCTGCTAGCAGTGTTCTAAGACATTATGCCCAAATTGTTTGGAGGAGGCATTTTTCTATGCGTTCTTATGAAGGGCTTACCTCTACTCTAGTAAATAAGTTTGCCTTTCCTATTAGTTTAGTCTCTACTAGATTTCATGTGGTTCGAAGTGCTATTGCTTTTTGTGCTGGAGAATTCGCCTGGACTAAGACAGCATGGGCTGATGGGGATTATTTTCCCAGCAGCAAATCATTATCCATGCATGCTCAAGACAGCCATATCTATATCACTGCTTTACTCTTTTCAGTATTGGAATGCTTTATTTTGTTACTAAGAGCATGTTATTTGGCAATTTTGTTCTCGCCAGTCATTATAATGGCACCATTTGCAGATAGTTTTGGGATACAGTATAGGAAAACATGGCTCTATCTTGTCCACCGTACTTTGGAGAGAGCAGGGCCTGCATTTATAAAATGGGGTCAGTGGGCAGCTACACGTCCAGACCTGTTTCCTGGGGATCTCTGTAATGAATTGACTATGCTTCATAGTAAAGCACCTGTCCATAGCTTTGCCTGCACAAAAAAGACAATTGAGAAAGCATTCAGCAGAAAGCTTTCTGATATTTTTGAAGATTTTGAAGAGCAGCCTGTAGCATCAGGAAGTGTGGCGCAAGTGCATAGAGCTTCTTTAAGAATTAAAAATTCAGGACAAAAGCTTAAGCGTGCTGTTGTTGCTGTAAAAGTTAGGCATCCTGGTGTTGGGGAATTAATTAAAAGGGATTTTGCATTGATAAATATGGTGGCTAAAATTTCAAATTATATGCCTGGTTTAAAGTGGCTTCGTCTTGATGAAAGTGTGCAGCAATTTGCTGTTTTCATGATGTCTCAAGTTGATCTCGCCAGAGAAGCGGCGCATTTGAGTCGATTTATTTACAATTTTCGTAGTTGGAAAGATGTCTCTTTTCCAAAGCCTCTCTATCCACTAGTGCATCCTGCTGTGTTGGTGGAGACTTATGAGCAGGGAGAAAGTGTTTCACATTATGTGGATGAGCTTGAAGGACACGATCGGTTAAAAAGTGCTTTGGCTCATATAGGAACTCATGCGCTCCTAAAGATGCTCTTGGTGGATAATTTTATCCATGCAGATATGCATCCTGGAAACATTCTTGTTCGAGTGCCTCAGTCCAAGCGTCCAAGTAAAGGGATCTTCAAGTCGAAGCCTCATGTTGTATTTCTTGATGTAGGCATGACGGCCGAACTCTCCAGCAATGATCGGGCAAATTTGCTAGAGTTTTTCAAAGCTGTTGTGCTTAGAGATGGCCGCACTGCTGCAAACTGCACATTGCGCTTATCTAAGCAACAGAACTGTCCAAATCCTGAGGCTTTTATTGAGGAAGTAGAGAAATCATTTTCCTTTTGGGGTACCCCACAAGGTGACCTTGTCCATCCAGCTGAGTGCATGCATCAGCTGCTTAATCAAGTCCAGCGGCATAAAGTGAACATCGATGGCAACGTTTGTGCCGTTATGGTGACGACTCTGGTTCTCGAGGTCAATCGACTTAATTCAGATTGTGGGTGCCTAACTTAAATACACTCAAGTTCAAAACTTCATTCGAAATCCAACTTGCCTTATTTGTTGGGTTCGAATCAAATTCTTGTGCCGTGTCGCCTTTAAAGTTACCATTATATAATAAACTCTCACTAAGTGGATGAGATTCCAGATATTTAAGATTGAATAAAGTTTGGCCGTCAAAGTTGCAGTCAAACAAAAATTGCAAAGTTCGAGTGCAGAACACGAGCAAGTGCACCGCTCTCTCAATTCTTTGTGCAGAAACATATTTTTTGCATGATTTTTGTCTTTTTTATGTGTAGCACAACCACAACAGCAGCCAACAAAAATCGGCAAGTGTCATTGCACGCCACACCCCCGCCGGCGCTTGACATGCCAGTGTGCCGCACTCGTGTGGTTTTTTTGCATTTTTTTGTCCAAGTGCCAAACAAAATATATGTATCATGCAAGGCTGGCAGAGGAAGCTTGATCCGGATTACAATGTGATGCAGACTCTTCAGAAATTGTTATTCAAAGCTGAATGGGTTGAGTCTCTAATATACACAATTGAGGGGCTTTTGGGATAAACTTTGTTCTTCTTACAAAAATTTTGACAGATGCAAAAGCTGATAAATATAGGGGATATGTTAATTGATCTCCTGCTGTGTTATATTTTTATTTTTTTGGGGTGGAGCATTTACTTGCAGTGCACCCAAATCTTTATAATTTATACATCGAGCCCCAATTTTGAAAGTTGCAAATAAAGCACACCACTCGCTTCAATATATGTATCTTATTAATCTGTAAATGGAGCTTGTT

Network for GWHGAAEX001710

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03109.15	ABC1	310	434	2.40E-30

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	15.440
SRP064423	SRR2545915	Juvenile tuber	10.500
SRP108465	SRR5643513	five period of Gastrodia elata	8.550
	SRR5643514	five period of Gastrodia elata	9.460
	SRR5643515	five period of Gastrodia elata	9.280
	SRR5643524	five period of Gastrodia elata	9.940
	SRR5643525	five period of Gastrodia elata	9.600
	SRR5643528	five period of Gastrodia elata	11.940
	SRR5643658	five period of Gastrodia elata	8.080
	SRR5643659	five period of Gastrodia elata	12.720
	SRR5643660	five period of Gastrodia elata	12.870
	SRR5643661	five period of Gastrodia elata	11.230
	SRR5643662	five period of Gastrodia elata	13.660
	SRR5643663	five period of Gastrodia elata	11.340
	SRR5643664	five period of Gastrodia elata	10.640
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	9.240
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	11.910
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.010
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.130
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	10.300
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	10.870
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	9.730
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.510
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	11.490
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.730
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	13.420
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	13.420
SRP279888	Gastro	Gastrodia elata tuber	10.92
	Juven	Juvenile tuber	9.19
	Mother_Gastro	Mother tuber of Gastrodia elata	9.28
	Mother_Juven	Mother tuber of Juvenile	9.79