Gene detail

Detail information of GWHGAAEX001712/evm.TU.scaffold_111.98

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|336117058\|ref\|YP_004571825.1\|	7.00E-25	serine/threonine protein kinase [Microlunatus phosphovorus NM-1]
KOG	KOG1187	1.00E-156	Serine/threonine protein kinase
nr	gi\|743826222\|ref\|XP_010933226.1\|	0	PREDICTED: receptor-like serine/threonine-protein kinase ALE2 [Elaeis guineensis]
Swissprot	tr\|Q8RWW0\|ALE2_ARATH	0	Receptor-like serine/threonine-protein kinase ALE2 (Precursor)
trEMBL	tr\|A0A059A908\|A0A059A908_EUCGR	0	Uncharacterized protein {ECO:0000313\|EMBL:KCW50146.1}
TAIR	AT2G20300	1.00E-156	Protein kinase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000111	2850071	2868581	-

Transcript Sequence
>GWHTAAEX001712 GCCACTGTAGAAAGGAGAGAGAGAAAAGTGCAAATCTCATTAATGCGCATCGACAAGCTTTCCGTTGTTTCTCTCTCTACCTCCTGTCGCCCTTTGGGACTCTCCCTCGCCTCTCTCGGACTTACTGCTGTGGATGCGGACGTTCAGAGGAGAGAAGGATGTAAGATGCCGACAACCCTTTCATTAGGGTTTAACTAATTTCTTAGGGCAATCTGATCCGCCATGGATGCTGGAATTCGTGCTTTACGTCGCGAGATCGCTTCATTGATCCCCGTAGCTTGATTCAGGGGAAGGATGAGAGTTCTTCTAATGCTTTTTTCGTGCCTTGCGCTGCTCACTTTCTCCTTCGGGGTTGCTTTAGGTGGGCTTCATTCGTACTTCCTCTTTATTTCAAGTCATCGGTCAACGAAACCAAGACCTGTTATTAGCCCAACAATAGCACCTTCCAGGGCACCCAAAAATTGGGCCATGGCACCATGGGCACCAAAGGCTCCCCTTGCATTATCACCGCAACATAGTGGAAAAACTGGAAACCATTTCCATAAAAAAAAACCACAGGCAGGTGCAGCATCCCATTATTTTCTGCCAAAAGAAAATTGTGAGAGAATAACATGTTCAGATCCTCTTACTCGGACACCAATTGGGTCACCTTGTGGCTGCGTGTACCCAATAAAAGTGGTTATTGATGTAGGGGTAGAACCAATTCTACTGTTTCCTGAGATTGCAGAACTTGAAATTGAGGTAGCAGCCGGCACATTTCTAAAGCAGAGTCAAGTTCGAATTATGGGTGCTGACGCGAGTATCTATAGTCAAGAAAGGACGACGGTTTCTATATATTTGGTTCCATTGGGCGAAAGATTTGACGAAATGACCGCATTGCTTATTTATGATAGGTTTTGGCAGAAAAAAGTTCGAATAAGTGCATCCAATTTTGGTGACTATGAAGTGATATCTGTTCATTATCCAGGGCTTCCTTCCTCGCCGCCACCCGGAAATTGGGAATCTTTAAATGTTGGCCCCAGTGGAAGTCGAGAGTACCCACTTACAGCACATGTGCCTGCTGGCAAGAAACAAAACATGGATGACAGGATAATTGTTCTAATCTCTCTTTCCTCATTTTTACTTATTTTTGTTTGTGTTGGAGTGGCTTTTATAATCCTTAAATTGAAGAAATCAGAACAGCAGCCTATTGCTGCCAGCTCTGCTGTTGCCCCCTTTACTAAGAGAACTGGAACAAAGTCTATTATACAAAGTAGTGTTGTAAGTTCAGCATCCATGTCTTATGTTTCTACAAGGGTTGCTTGCCCATCATCAGTGAAGACATTTTTATTAACTGATCTGATGAAAGCAACCAATGGATTTAGTTCAGAGAGATTACTGGGCGAGGGTGGGTTTGGACGTGTTTATCTTGGGATTATGGAACATGGCGAAGAAGTTGCTATTAAACTGCTGAGTTTGGAGGAGCATAATTTCGATAGTGAATTCATCAGAGAAGTAGAGATGCTTTGCAGAATGCATCATCGTAATCTTGTCAAGCTGATTGGTATATGCATCGAGGGTCGTAAGCGCTGTCTGGTCTACGAACTTGTATGCAATGGGAGTGTTGAATCCCATCTCCATGGTGCTGATAAGGACAAGCACAAATTGAGCTGGGAAGCAAGAATGAAGATAGCCCTTGGTGCTGCCCGAGGCCTTTCGTACCTGCATGAAGATTCCAATCCTCGTGTTATTCATCGCGATTTTAAGGCCAGCAATGTACTCCTGGAAGAGGATTTCACTCCCAAGGTTTCGGATTTCGGGCTGGCAAAAGAAGCATCTGATGCGAGCCACCATATTTCCACCCGGGTTATGGGGACTTTCGGGTACGTGGCACCGGAGTATGCACTGACGGGCCATCTTTTGGTCAAGAGTGATGTGTACAGCTACGGCGTGGTGCTCCTGGAGCTCCTGACGGGCCGCAAGCCGGTGCGCATTTCTGATTCCGGCGAGCCTGAGAATCTGGTGACCCTCGCCCGCCCCCTTCTCACGAGCAAAGAGGGCTTGGAGCAGATCATAGATCCATCCCTCCTTGGAAGCTGTGATTTCGACGAGTTCGCCGGAGTGGCCGCAGTGGCCTCCATGTGCGTTCACCCCGAGGCATCCCGGAGGCCATTCATGGGAGAAGTCGTACAGGCGTTGAAGCTGATACCGGGCGAAGCGAACAGCAGGAGAGACGAGTGCTCGTCGTCGTCATTCCGGGACTGCGACTACAAAGGCGAAGAGTTCGGGATGGAGAGCGCATGGTGGAGCGCCGGATCGCCGGATCGGATCGATCATCGTCCCGATTCTTCTTCGGTCGAGAGCGCGGGATCGAGAGATTGCTGCACCAGATCTGAATCTCTGGGAATCGAGAGGAAGAAGAAGAACAAGAAAAAGAACTCCGCGCTTCTTGGGCTGAGGAACGCCGTGAGTGAGCCCTTCGGGTGCTGAACGGAAGGAATCAAGGGGATGATGCATCTTCAGCTTCTGCAAGTGTATATATAGGCGCTAAGTTTTTACAAATACAGCACCCGAGTTTTTTATAATTAGCGTTTCCACCCTTTAAGTATTTATTTTTACAAATAAAGCACTATCATAATGGGACGGTAGTGTTTTTCTCTTTGGGTGCTGCTGAATATGTAATATTATTATTGTTTGGGTGTTGTTTAGGTAAAAAAATGACACTTTGGTTTCTGATTTTGGAGATCGTGATTCTTATCTTTTTGCATCAAATCTATTTGCAGCAAACGCAGAAGC

Network for GWHGAAEX001712

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.16	Pkinase_Tyr	359	626	6.80E-47

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_Extensin

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0004672	Molecular Function	protein kinase activity
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.390
SRP064423	SRR2545915	Juvenile tuber	7.670
SRP108465	SRR5643513	five period of Gastrodia elata	11.300
	SRR5643514	five period of Gastrodia elata	12.290
	SRR5643515	five period of Gastrodia elata	9.570
	SRR5643524	five period of Gastrodia elata	9.830
	SRR5643525	five period of Gastrodia elata	9.090
	SRR5643528	five period of Gastrodia elata	4.310
	SRR5643658	five period of Gastrodia elata	7.510
	SRR5643659	five period of Gastrodia elata	9.620
	SRR5643660	five period of Gastrodia elata	9.310
	SRR5643661	five period of Gastrodia elata	9.740
	SRR5643662	five period of Gastrodia elata	10.270
	SRR5643663	five period of Gastrodia elata	7.970
	SRR5643664	five period of Gastrodia elata	9.390
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	10.280
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	12.370
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	11.460
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	10.690
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.810
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.020
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	8.930
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	11.320
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.600
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	9.640
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.730
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.730
SRP279888	Gastro	Gastrodia elata tuber	9.97
	Juven	Juvenile tuber	9.38
	Mother_Gastro	Mother tuber of Gastrodia elata	7.54
	Mother_Juven	Mother tuber of Juvenile	6.43