Gene detail

Detail information of GWHGAAEX001733/evm.TU.scaffold_111.121

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|212639050\|ref\|YP_002315570.1\|	1.00E-48	Sucrase-6-phosphate hydrolase [Anoxybacillus flavithermus WK1]
KOG	KOG0228	0	Beta-fructofuranosidase (invertase)
nr	gi\|672141933\|ref\|XP_008794813.1\|	0	PREDICTED: beta-fructofuranosidase 1-like [Phoenix dactylifera]
Swissprot	tr\|P49175\|INV1_MAIZE	0	Beta-fructofuranosidase 1 (Precursor)
trEMBL	tr\|H2D4Y7\|H2D4Y7_MUSAC	0	Vacuolar invertase {ECO:0000313\|EMBL:AEX15265.1}
TAIR	AT1G12240	0	Glycosyl hydrolases family 32 protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000111	3417906	3423156	+

Transcript Sequence
>GWHTAAEX001733 ATGAATCTCCCCAACGTCCGGAATTCCACGGTGGCGATCCAACAGCTCCACCGGTCCCACGCACCAGCTCATTCCCCCAACCCCATTCCCATCGTGACACGTCAGAATCAATTCGCACCCAGCTTCACCCACCCTTCCCATCTATATATATGGCCCCACTTTCCCCCTGTCATCTGCTCCAGACATTCATTTCTCATGGCCCAACCCTTCTCCTACGCCCCTCTTCCAGCCACAGCCACCGCTACCGACACAGCCGGTAACAAGCCTTGCCGGCGCCTCTTCTTCTCCCTCTCCCTGTTGGCATTTTCCGGTTTTCTGATCTACCGCTCCTCGGTTACCAACGTGAGCCAAATCGAGCCCGGGCCCGACCGGGTTGAACCCGGGTGGGCCTCCCGCGGCCCTGCCGTCGGGATCTCCGAGAAAGCGGGCTCGGATTTCCTTTCGGGTCACCGGACGGCCTACCCATGGACCAACGACATGCTTCAATGGCAGAGGACCGGATTCCATTTTCAGCCTCCCAGGAACTGGATGAACGATCCGAATGGCCCAGTACTGTACAAAGGATGGTACCACCTCTTCTACCAGTACAACTGCGACGGGGTTGTGTGGGGGAATATCACGTGGGGACACGCAGCATCACGTGATCTCCTCCATTGGCTCCACCTCCCCGTCGCAATGCTCCCGGACCGTTGGTACGATACCAACGGAGTCTGGACGGGGTCTGCCACGGTCCTCCCGGATGGGAATCTGGTAATGATCTACACAGGTTCGACGAACTCGACGGCCCAAGTACAGTGCTTGGCCGTCCCAGCCGATCCCGAAGGGGATCCCCTCCTCATTCGTTGGCGGAAGCACGAGGCGAACCCAGTCCTGCTACCGCCACCCTCCGTGCTCCCCAGAGACTTCCGGGACCCGACGACTGCGTGGACCGACCCATCCGATCCGTCCACGTTCCTCCTTGCGATCGGCTCGAAGGACGACTCGGCCGGGCTCCACACCGGCGTCACCTATGTGTACTCCACGCGAGACTTTCTGTCGTTCCAGCTCCTCCCCGGCGTGCTGCACGCAGTGGAGGGCACGGGAATGTGGGAGTGCGTGGATTTCTTTCCCGTCAGCACGGACGACGCCTCTGCAAGATTCGGGCTCGACACGTCGGAGAGGGCGGGGGAGAGGGTGAAGCACGTGTTGAAGGCGAGCATGGACGACGACCGGCGCGATTACTACGCACTCGGTTCGTACGACGCGGAGGCGAACAAGTGGGCGCCGGACGATGCCGAGAACGATGTCGGCATCGGGCTCCGGTACGACTGGGGGAAGTTCTACGCGTCGAAGACATTTTACGACGAGGACAAGAAGAGGAGGGTCCTGTGGGGTTGGGTCGGGGAGGCAGACAGCGAGCGCGCAGACGCATCCAAGGGTTGGGCCTCCATCATGAGCATCCCGCGGACGGTGGTGTTCGATTCTAAGACGGCGAGCAATTTGCTGTTCTGGCCGGTAGACGAGGTGGGCTCGCTCCGGGCGGCGCTGCACGAGTTCACCTCAGTGGTCGCCGGGCCCGGCGCCGTCGTCCCCCTCAGAATTCCGTTGACGGCGAAGGCAGCCCAATTGGATATCGAAGCGGAGTTCGAGGTTTTGCGGCCGGCGGAGGCGGAAGCGGACGTCGGATACAATTGCAGCACCGCCGGGGGAGCCGCCGGCCGCGGCGTTCTAGGGCCGTTTGGGCTCCTCGTCCTCGCAACCGAGAATCTCGCGGAACAGACGGCCACGTATTTCTATCTTTCAAGGGCCGCCGGCGGCGGCCTGCAGACACATTTTTGTCAGGATGAGACTCGGTCGTCTGCTGCAAGCGATATAGAGAAGAAGGTGGTGGGGTCCACCGTTCCGGTTCTTTATGGCGAGCTGTTGACAGTTAGGATCCTGATTGATCATTCAATAGTAGAGAGCTTTGCACAAGGAGGAAGATCAGCAATTACTTCTCGTGTATACCCAACCAAGTCTTTCAAGTCAGCTAAAGTATTCTTATTCAATAATGCTACCTCTGCATCCATAAAGGCAAAGACCATCAAAATTTGGGAGATGGACTCAACTTTTAATCATATATATGGGGATGAAGCACAAAGATACACATGATATTAATTATATATTTTTTATGTGTGGCCGGCAAAACCTCAAATATGGGGAGGAAGCACAAAAACACAATGGTGGGATTTGAACCCATGACCTGGGATAACAAATCCTGAGCCTCAACCACTGGACTACAACACCATTCACCATATTAATTATATATATATTGATTTGGATATGTCATCATCAATGTATTAGCCTTTAGTTCTTTGTAATTACAATTTATTAATTGTTGTATTAGGAAGAAAGGGTGAGGATTAAGATGGAAAGACTTGCAAAAATACATCTTAAGTCCCACCAAAATTGATTGAAATTTGTAATTAAATTTAGGATGAAAGTTATGGGAAATATTGGTATTTCAATCCTAATTAAGTTAATCAAAATTAAAGGAATTGATTTTTTTTTTTT

Network for GWHGAAEX001733

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF11837.7	DUF3357	71	161	4.40E-09
PF00251.19	Glyco_hydro_32N	169	498	8.50E-102
PF08244.11	Glyco_hydro_32C	530	692	5.50E-26

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GH32
Carbohydrate-Active enzymes Family	GH32

KEGG pathway

KO	Enzyme	pathway	mapID
K01193	INV, sacA	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Galactose metabolism	map00052
		Starch and sucrose metabolism	map00500

Gene Ontology

GO term	Ontology	Name
GO:0005975	Biological Process	carbohydrate metabolic process
GO:0004553	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004575	Molecular Function	sucrose alpha-glucosidase activity
GO:0004564	Molecular Function	beta-fructofuranosidase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.620
SRP064423	SRR2545915	Juvenile tuber	2.400
SRP108465	SRR5643513	five period of Gastrodia elata	9.880
	SRR5643514	five period of Gastrodia elata	105.790
	SRR5643515	five period of Gastrodia elata	80.880
	SRR5643524	five period of Gastrodia elata	26.220
	SRR5643525	five period of Gastrodia elata	101.400
	SRR5643528	five period of Gastrodia elata	70.010
	SRR5643658	five period of Gastrodia elata	112.100
	SRR5643659	five period of Gastrodia elata	67.180
	SRR5643660	five period of Gastrodia elata	31.070
	SRR5643661	five period of Gastrodia elata	10.180
	SRR5643662	five period of Gastrodia elata	1.620
	SRR5643663	five period of Gastrodia elata	3.020
	SRR5643664	five period of Gastrodia elata	2.610
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	28.760
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	30.680
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	60.850
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	18.370
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	28.310
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	20.940
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	91.540
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	25.690
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	43.120
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	77.390
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	65.820
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	65.820
SRP279888	Gastro	Gastrodia elata tuber	3.44
	Juven	Juvenile tuber	3.74
	Mother_Gastro	Mother tuber of Gastrodia elata	286.64
	Mother_Juven	Mother tuber of Juvenile	8.49