Detail information of GWHGAAEX001741/evm.TU.scaffold_112.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31069.00E-105ER lumen protein retaining receptor
nrgi|643715652|gb|KDP27593.1|1.63E-110hypothetical protein JCGZ_19598 [Jatropha curcas]
Swissprottr|P35402|ERD2A_ARATH2.00E-24ER lumen protein-retaining receptor A
trEMBLtr|A0A067JXP6|A0A067JXP6_JATCU6.00E-111Uncharacterized protein {ECO:0000313|EMBL:KDP27593.1}
TAIRAT1G199709.00E-105ER lumen protein retaining receptor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000113104579118136-
Transcript Sequence

Network for GWHGAAEX001741

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00810.17ER_lumen_recept692111.20E-33
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006621Biological Processprotein retention in ER lumen
GO:0046923Molecular FunctionER retention sequence binding
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.300
SRR2545915Juvenile tuber1.220
SRP108465SRR5643513five period of Gastrodia elata1.870
SRR5643514five period of Gastrodia elata3.690
SRR5643515five period of Gastrodia elata2.180
SRR5643524five period of Gastrodia elata3.420
SRR5643525five period of Gastrodia elata1.950
SRR5643528five period of Gastrodia elata1.480
SRR5643658five period of Gastrodia elata1.170
SRR5643659five period of Gastrodia elata0.550
SRR5643660five period of Gastrodia elata0.360
SRR5643661five period of Gastrodia elata0.480
SRR5643662five period of Gastrodia elata0.890
SRR5643663five period of Gastrodia elata0.270
SRR5643664five period of Gastrodia elata0.550
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.250
SRR6049655Rhizomagastrodiae_C368-T10_good_13.480
SRR6049656Rhizomagastrodiae_C368-T07_good_13.270
SRR6049657Rhizomagastrodiae_C368-T07_good_14.000
SRR6049658Rhizomagastrodiae_C368-T04_good_16.270
SRR6049659Rhizomagastrodiae_C368-T04_good_16.060
SRR6049660Rhizomagastrodiae_C368-T01_good_15.170
SRR6049661Rhizomagastrodiae_C368-T04_good_15.930
SRR6049662Rhizomagastrodiae_C368-T01_good_14.490
SRR6049663Rhizomagastrodiae_C368-T01_good_15.940
SRR6049664Rhizomagastrodiae_C368-T10_good_13.160
SRR6049665Rhizomagastrodiae_C368-T10_good_13.160
SRP279888GastroGastrodia elata tuber 0.96
JuvenJuvenile tuber1.55
Mother_GastroMother tuber of Gastrodia elata 4.01
Mother_JuvenMother tuber of Juvenile 2.54