Detail information of GWHGAAEX001744/evm.TU.scaffold_112.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|719970577|ref|XP_010271699.1|0PREDICTED: uncharacterized protein LOC104607701 [Nelumbo nucifera]
trEMBLtr|W1NLG2|W1NLG2_AMBTC0Uncharacterized protein {ECO:0000313|EMBL:ERM96652.1}
TAIRAT3G195400Protein of unknown function (DUF620)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000113182677185027+
Transcript Sequence

Network for GWHGAAEX001744

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04788.11DUF6201493915.20E-116
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.370
SRR2545915Juvenile tuber12.070
SRP108465SRR5643513five period of Gastrodia elata7.240
SRR5643514five period of Gastrodia elata7.490
SRR5643515five period of Gastrodia elata6.890
SRR5643524five period of Gastrodia elata6.210
SRR5643525five period of Gastrodia elata2.870
SRR5643528five period of Gastrodia elata4.360
SRR5643658five period of Gastrodia elata1.090
SRR5643659five period of Gastrodia elata12.560
SRR5643660five period of Gastrodia elata8.070
SRR5643661five period of Gastrodia elata12.710
SRR5643662five period of Gastrodia elata9.940
SRR5643663five period of Gastrodia elata8.830
SRR5643664five period of Gastrodia elata10.510
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.730
SRR6049655Rhizomagastrodiae_C368-T10_good_17.330
SRR6049656Rhizomagastrodiae_C368-T07_good_112.260
SRR6049657Rhizomagastrodiae_C368-T07_good_19.010
SRR6049658Rhizomagastrodiae_C368-T04_good_16.250
SRR6049659Rhizomagastrodiae_C368-T04_good_15.720
SRR6049660Rhizomagastrodiae_C368-T01_good_112.480
SRR6049661Rhizomagastrodiae_C368-T04_good_113.850
SRR6049662Rhizomagastrodiae_C368-T01_good_116.260
SRR6049663Rhizomagastrodiae_C368-T01_good_116.180
SRR6049664Rhizomagastrodiae_C368-T10_good_113.020
SRR6049665Rhizomagastrodiae_C368-T10_good_113.020
SRP279888GastroGastrodia elata tuber 6.44
JuvenJuvenile tuber7.94
Mother_GastroMother tuber of Gastrodia elata 4.15
Mother_JuvenMother tuber of Juvenile 3.24