Detail information of GWHGAAEX001759/evm.TU.scaffold_112.24
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|310821637|ref|YP_003953995.1| | 6.00E-19 | hypothetical protein STAUR_4388 [Stigmatella aurantiaca DW4/3-1] |
| KOG | KOG0584 | 0 | Serine/threonine protein kinase |
| nr | gi|672186166|ref|XP_008813013.1| | 0 | PREDICTED: probable serine/threonine-protein kinase WNK9 isoform X2 [Phoenix dactylifera] |
| Swissprot | tr|A2YMV6|WNK1_ORYSI | 0 | Probable serine/threonine-protein kinase WNK1 |
| trEMBL | tr|I1GT70|I1GT70_BRADI | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI1G23970.1} |
| TAIR | AT3G04910 | 0 | with no lysine (K) kinase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000113 | 526522 | 529508 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX001759
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 27 | 281 | 1.00E-47 |
| PF12202.7 | OSR1_C | 365 | 416 | 7.90E-06 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | WNK_NRBP |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004674 | Molecular Function | protein serine/threonine kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 24.740 |
| SRR2545915 | Juvenile tuber | 18.290 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 17.060 |
| SRR5643514 | five period of Gastrodia elata | 19.990 | |
| SRR5643515 | five period of Gastrodia elata | 25.510 | |
| SRR5643524 | five period of Gastrodia elata | 22.500 | |
| SRR5643525 | five period of Gastrodia elata | 32.430 | |
| SRR5643528 | five period of Gastrodia elata | 43.740 | |
| SRR5643658 | five period of Gastrodia elata | 29.300 | |
| SRR5643659 | five period of Gastrodia elata | 16.860 | |
| SRR5643660 | five period of Gastrodia elata | 13.210 | |
| SRR5643661 | five period of Gastrodia elata | 14.700 | |
| SRR5643662 | five period of Gastrodia elata | 18.280 | |
| SRR5643663 | five period of Gastrodia elata | 17.620 | |
| SRR5643664 | five period of Gastrodia elata | 21.360 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 22.380 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 23.200 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 21.340 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 20.960 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 24.310 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 27.020 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 26.090 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 21.940 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 22.590 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 24.130 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 24.110 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 24.110 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 14.98 |
| Juven | Juvenile tuber | 11.60 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 73.98 | |
| Mother_Juven | Mother tuber of Juvenile | 50.03 |