Detail information of GWHGAAEX001770/evm.TU.scaffold_112.37


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|189502744|ref|YP_001958461.1|2.00E-24hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
nrgi|743763387|ref|XP_010911875.1|0PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Elaeis guineensis]
Swissprottr|Q9XID3|Y1343_ARATH0G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 (Precursor)
trEMBLtr|A0A096RU06|A0A096RU06_MAIZE0Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G113158_P01}
TAIRAT1G343000lectin protein kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000113803144805546-
Transcript Sequence

Network for GWHGAAEX001770

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01453.23B_lectin741655.10E-19
PF00954.19S_locus_glycop2372991.30E-06
PF00069.24Pkinase4896899.70E-45
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_SD-2b

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0048544Biological Processrecognition of pollen
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0004674Molecular Functionprotein serine/threonine kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.180
SRR2545915Juvenile tuber3.700
SRP108465SRR5643513five period of Gastrodia elata7.510
SRR5643514five period of Gastrodia elata6.010
SRR5643515five period of Gastrodia elata5.300
SRR5643524five period of Gastrodia elata5.820
SRR5643525five period of Gastrodia elata8.890
SRR5643528five period of Gastrodia elata7.320
SRR5643658five period of Gastrodia elata11.470
SRR5643659five period of Gastrodia elata11.390
SRR5643660five period of Gastrodia elata15.930
SRR5643661five period of Gastrodia elata12.970
SRR5643662five period of Gastrodia elata10.980
SRR5643663five period of Gastrodia elata11.340
SRR5643664five period of Gastrodia elata13.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.430
SRR6049655Rhizomagastrodiae_C368-T10_good_112.450
SRR6049656Rhizomagastrodiae_C368-T07_good_122.240
SRR6049657Rhizomagastrodiae_C368-T07_good_116.190
SRR6049658Rhizomagastrodiae_C368-T04_good_129.070
SRR6049659Rhizomagastrodiae_C368-T04_good_133.750
SRR6049660Rhizomagastrodiae_C368-T01_good_118.550
SRR6049661Rhizomagastrodiae_C368-T04_good_121.920
SRR6049662Rhizomagastrodiae_C368-T01_good_117.920
SRR6049663Rhizomagastrodiae_C368-T01_good_123.930
SRR6049664Rhizomagastrodiae_C368-T10_good_126.480
SRR6049665Rhizomagastrodiae_C368-T10_good_126.480
SRP279888GastroGastrodia elata tuber 9.55
JuvenJuvenile tuber7.15
Mother_GastroMother tuber of Gastrodia elata 9.27
Mother_JuvenMother tuber of Juvenile 4.96