Detail information of GWHGAAEX001774/evm.TU.scaffold_112.41
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|108762024|ref|YP_630798.1| | 2.00E-22 | metallophosphoesterase [Myxococcus xanthus DK 1622] |
| KOG | KOG1378 | 0 | Purple acid phosphatase |
| nr | gi|575074842|dbj|BAO45898.1| | 0 | purple acid phosphatase [Acacia mangium] |
| Swissprot | tr|Q5MAU8|PPA27_ARATH | 0 | Probable inactive purple acid phosphatase 27 (Precursor) |
| trEMBL | tr|W0TSA4|W0TSA4_ACAMN | 0 | Purple acid phosphatase {ECO:0000256|RuleBase:RU361203} |
| TAIR | AT1G13750 | 0 | Purple acid phosphatases superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000113 | 959099 | 961874 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX001774
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF16656.4 | Pur_ac_phosph_N | 65 | 168 | 2.20E-09 |
| PF00149.27 | Metallophos | 182 | 396 | 1.80E-19 |
| PF14008.5 | Metallophos_C | 421 | 480 | 2.50E-13 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0046872 | Molecular Function | metal ion binding |
| GO:0003993 | Molecular Function | acid phosphatase activity |
| GO:0016787 | Molecular Function | hydrolase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 31.750 |
| SRR2545915 | Juvenile tuber | 14.960 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 30.970 |
| SRR5643514 | five period of Gastrodia elata | 112.930 | |
| SRR5643515 | five period of Gastrodia elata | 109.170 | |
| SRR5643524 | five period of Gastrodia elata | 136.220 | |
| SRR5643525 | five period of Gastrodia elata | 20.600 | |
| SRR5643528 | five period of Gastrodia elata | 25.800 | |
| SRR5643658 | five period of Gastrodia elata | 15.520 | |
| SRR5643659 | five period of Gastrodia elata | 35.670 | |
| SRR5643660 | five period of Gastrodia elata | 34.220 | |
| SRR5643661 | five period of Gastrodia elata | 29.110 | |
| SRR5643662 | five period of Gastrodia elata | 17.550 | |
| SRR5643663 | five period of Gastrodia elata | 14.330 | |
| SRR5643664 | five period of Gastrodia elata | 13.810 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 95.860 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 98.530 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 85.180 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 43.290 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 100.510 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 89.000 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 52.920 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 58.870 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 177.810 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 167.120 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 212.280 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 212.280 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 21.83 |
| Juven | Juvenile tuber | 15.79 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 184.24 | |
| Mother_Juven | Mother tuber of Juvenile | 54.71 |