Detail information of GWHGAAEX001786/evm.TU.scaffold_112.52


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17259.00E-39Protein involved in membrane traffic (YOP1/TB2/DP1/HVA22 family)
nrgi|743803181|ref|XP_010926852.1|8.62E-58PREDICTED: HVA22-like protein e [Elaeis guineensis]
Swissprottr|Q07764|HVA22_HORVU4.00E-50Protein HVA22
trEMBLtr|M0RFQ5|M0RFQ5_MUSAM1.00E-55Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P05780_001}
TAIRAT5G507209.00E-39HVA22 homologue E

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011312027211203769+
Transcript Sequence

Network for GWHGAAEX001786

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03134.18TB2_DP1_HVA2224993.40E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.680
SRR2545915Juvenile tuber3.060
SRP108465SRR5643513five period of Gastrodia elata1.480
SRR5643514five period of Gastrodia elata2.120
SRR5643515five period of Gastrodia elata0.970
SRR5643524five period of Gastrodia elata2.430
SRR5643525five period of Gastrodia elata27.230
SRR5643528five period of Gastrodia elata25.250
SRR5643658five period of Gastrodia elata46.580
SRR5643659five period of Gastrodia elata0.120
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.270
SRR5643662five period of Gastrodia elata0.130
SRR5643663five period of Gastrodia elata0.100
SRR5643664five period of Gastrodia elata0.980
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.260
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.350
SRR6049657Rhizomagastrodiae_C368-T07_good_10.950
SRR6049658Rhizomagastrodiae_C368-T04_good_13.070
SRR6049659Rhizomagastrodiae_C368-T04_good_12.040
SRR6049660Rhizomagastrodiae_C368-T01_good_10.700
SRR6049661Rhizomagastrodiae_C368-T04_good_10.570
SRR6049662Rhizomagastrodiae_C368-T01_good_10.430
SRR6049663Rhizomagastrodiae_C368-T01_good_10.740
SRR6049664Rhizomagastrodiae_C368-T10_good_10.740
SRR6049665Rhizomagastrodiae_C368-T10_good_10.740
SRP279888GastroGastrodia elata tuber 2.17
JuvenJuvenile tuber2.34
Mother_GastroMother tuber of Gastrodia elata 2.36
Mother_JuvenMother tuber of Juvenile 8.16