Detail information of GWHGAAEX001795/evm.TU.scaffold_112.61


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|16263319|ref|NP_436112.1|2.00E-06CyaI3 adenylate/guanylate cyclase [Sinorhizobium meliloti 1021]
KOGKOG43746.00E-31RNA-binding protein Bicaudal-C
nrgi|672134127|ref|XP_008790708.1|3.41E-40PREDICTED: uncharacterized protein LOC103707821 [Phoenix dactylifera]
trEMBLtr|M0T1H2|M0T1H2_MUSAM2.00E-40Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P24970_001}
TAIRAT3G488006.00E-31Sterile alpha motif (SAM) domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011313500021351128-
Transcript Sequence

Network for GWHGAAEX001795

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00536.29SAM_11291847.40E-13
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.240
SRR2545915Juvenile tuber10.700
SRP108465SRR5643513five period of Gastrodia elata8.130
SRR5643514five period of Gastrodia elata8.520
SRR5643515five period of Gastrodia elata7.140
SRR5643524five period of Gastrodia elata7.230
SRR5643525five period of Gastrodia elata13.520
SRR5643528five period of Gastrodia elata9.460
SRR5643658five period of Gastrodia elata7.310
SRR5643659five period of Gastrodia elata9.540
SRR5643660five period of Gastrodia elata11.100
SRR5643661five period of Gastrodia elata11.570
SRR5643662five period of Gastrodia elata12.840
SRR5643663five period of Gastrodia elata9.700
SRR5643664five period of Gastrodia elata12.480
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.560
SRR6049655Rhizomagastrodiae_C368-T10_good_111.200
SRR6049656Rhizomagastrodiae_C368-T07_good_17.510
SRR6049657Rhizomagastrodiae_C368-T07_good_17.980
SRR6049658Rhizomagastrodiae_C368-T04_good_17.720
SRR6049659Rhizomagastrodiae_C368-T04_good_18.950
SRR6049660Rhizomagastrodiae_C368-T01_good_18.180
SRR6049661Rhizomagastrodiae_C368-T04_good_18.140
SRR6049662Rhizomagastrodiae_C368-T01_good_17.380
SRR6049663Rhizomagastrodiae_C368-T01_good_17.270
SRR6049664Rhizomagastrodiae_C368-T10_good_18.850
SRR6049665Rhizomagastrodiae_C368-T10_good_18.850
SRP279888GastroGastrodia elata tuber 15.27
JuvenJuvenile tuber8.02
Mother_GastroMother tuber of Gastrodia elata 14.79
Mother_JuvenMother tuber of Juvenile 10.68