Detail information of GWHGAAEX001796/evm.TU.scaffold_112.63
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|343083395|ref|YP_004772690.1| | 1.00E-14 | glycosyltransferase domain-containing protein [Cyclobacterium marinum DSM 745] |
| KOG | KOG3349 | 8.00E-78 | Predicted glycosyltransferase |
| nr | gi|695024784|ref|XP_009399620.1| | 1.38E-82 | PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Musa acuminata subsp. malaccensis] |
| trEMBL | tr|M0SVT4|M0SVT4_MUSAM | 5.00E-83 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P05050_001} |
| TAIR | AT4G16710 | 8.00E-78 | glycosyltransferase family protein 28 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000113 | 1360045 | 1367365 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX001796
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF04101.15 | Glyco_tran_28_C | 15 | 160 | 3.20E-31 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K07432 | ALG13 | Metabolic pathways | map01100 |
| N-Glycan biosynthesis | map00510 | ||
| Various types of N-glycan biosynthesis | map00513 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016758 | Molecular Function | transferase activity, transferring hexosyl groups |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 24.920 |
| SRR2545915 | Juvenile tuber | 19.910 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 18.130 |
| SRR5643514 | five period of Gastrodia elata | 14.520 | |
| SRR5643515 | five period of Gastrodia elata | 17.630 | |
| SRR5643524 | five period of Gastrodia elata | 14.790 | |
| SRR5643525 | five period of Gastrodia elata | 25.510 | |
| SRR5643528 | five period of Gastrodia elata | 37.840 | |
| SRR5643658 | five period of Gastrodia elata | 23.740 | |
| SRR5643659 | five period of Gastrodia elata | 19.510 | |
| SRR5643660 | five period of Gastrodia elata | 20.720 | |
| SRR5643661 | five period of Gastrodia elata | 15.840 | |
| SRR5643662 | five period of Gastrodia elata | 18.640 | |
| SRR5643663 | five period of Gastrodia elata | 17.740 | |
| SRR5643664 | five period of Gastrodia elata | 19.760 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 10.330 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 12.600 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 10.120 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 11.340 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 8.990 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 11.800 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 11.500 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 9.930 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 10.060 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 8.090 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 8.890 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 8.890 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 23.83 |
| Juven | Juvenile tuber | 12.95 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 26.48 | |
| Mother_Juven | Mother tuber of Juvenile | 17.66 |