Detail information of GWHGAAEX001798/evm.TU.scaffold_112.66


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|449454949|ref|XP_004145216.1|2.07E-45PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Swissprottr|Q93W88|BH137_ARATH4.00E-44Transcription factor bHLH137
trEMBLtr|I1I908|I1I908_BRADI1.00E-45Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI3G41510.2}
TAIRAT4G345301.00E-37cryptochrome-interacting basic-helix-loop-helix 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011313869881388177-
Transcript Sequence

Network for GWHGAAEX001798

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH38848.60E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.000
SRR5643514five period of Gastrodia elata0.430
SRR5643515five period of Gastrodia elata0.220
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata3.010
SRR5643660five period of Gastrodia elata2.880
SRR5643661five period of Gastrodia elata0.940
SRR5643662five period of Gastrodia elata0.830
SRR5643663five period of Gastrodia elata0.160
SRR5643664five period of Gastrodia elata0.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.630
SRR6049655Rhizomagastrodiae_C368-T10_good_12.060
SRR6049656Rhizomagastrodiae_C368-T07_good_12.190
SRR6049657Rhizomagastrodiae_C368-T07_good_11.120
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.350
SRR6049661Rhizomagastrodiae_C368-T04_good_10.980
SRR6049662Rhizomagastrodiae_C368-T01_good_13.350
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_14.990
SRR6049665Rhizomagastrodiae_C368-T10_good_14.990
SRP279888GastroGastrodia elata tuber 0.10
JuvenJuvenile tuber0.03
Mother_GastroMother tuber of Gastrodia elata 0.31
Mother_JuvenMother tuber of Juvenile 0.48