Detail information of GWHGAAEX001802/evm.TU.scaffold_112.69


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG18230DRIM (Down-regulated in metastasis)-like proteins
nrgi|743760739|ref|XP_010938573.1|0PREDICTED: small subunit processome component 20 homolog [Elaeis guineensis]
trEMBLtr|R7WDL8|R7WDL8_AEGTA0Small subunit processome component 20-like protein {ECO:0000313|EMBL:EMT18035.1}
TAIRAT4G309900ARM repeat superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011314239061458267+
Transcript Sequence

Network for GWHGAAEX001802

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07539.11DRIM87714931.10E-101
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms43.970
SRR2545915Juvenile tuber27.600
SRP108465SRR5643513five period of Gastrodia elata7.220
SRR5643514five period of Gastrodia elata8.080
SRR5643515five period of Gastrodia elata7.990
SRR5643524five period of Gastrodia elata8.170
SRR5643525five period of Gastrodia elata6.510
SRR5643528five period of Gastrodia elata5.630
SRR5643658five period of Gastrodia elata5.830
SRR5643659five period of Gastrodia elata9.650
SRR5643660five period of Gastrodia elata12.260
SRR5643661five period of Gastrodia elata9.790
SRR5643662five period of Gastrodia elata8.650
SRR5643663five period of Gastrodia elata10.420
SRR5643664five period of Gastrodia elata10.510
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.270
SRR6049655Rhizomagastrodiae_C368-T10_good_16.750
SRR6049656Rhizomagastrodiae_C368-T07_good_19.700
SRR6049657Rhizomagastrodiae_C368-T07_good_110.540
SRR6049658Rhizomagastrodiae_C368-T04_good_110.740
SRR6049659Rhizomagastrodiae_C368-T04_good_111.680
SRR6049660Rhizomagastrodiae_C368-T01_good_110.040
SRR6049661Rhizomagastrodiae_C368-T04_good_111.000
SRR6049662Rhizomagastrodiae_C368-T01_good_19.180
SRR6049663Rhizomagastrodiae_C368-T01_good_110.050
SRR6049664Rhizomagastrodiae_C368-T10_good_18.040
SRR6049665Rhizomagastrodiae_C368-T10_good_18.040
SRP279888GastroGastrodia elata tuber 16.45
JuvenJuvenile tuber16.47
Mother_GastroMother tuber of Gastrodia elata 11.12
Mother_JuvenMother tuber of Juvenile 20.51