Gene detail

Detail information of GWHGAAEX001813/evm.TU.scaffold_112.79

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|110637313\|ref\|YP_677520.1\|	8.00E-09	hypothetical protein CHU_0899 [Cytophaga hutchinsonii ATCC 33406]
KOG	KOG1021	0	Acetylglucosaminyltransferase EXT1/exostosin 1
nr	gi\|449440484\|ref\|XP_004138014.1\|	0	PREDICTED: probable beta-1,4-xylosyltransferase IRX10L-like [Cucumis sativus]
Swissprot	tr\|Q8S1X7\|GT15_ORYSJ	0	Probable glucuronosyltransferase Os01g0926700
trEMBL	tr\|A0A0A0LR22\|A0A0A0LR22_CUCSA	0	Uncharacterized protein {ECO:0000313\|EMBL:KGN63429.1}
TAIR	AT1G27440	0	Exostosin family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000113	1763902	1769099	+

Transcript Sequence
>GWHTAAEX001813 CACATGACAAAATCAAGATGGATAGAATAAGCCGAGCGAACGTCTTTCTCCGTATCTTTAAGCAAAGCTCAGAGGAGAAACATAAAAGCATACCAACTGCCTCTCATTCTTTCTATAAACCCAGAATTACTTGCTGCCTCTCCTTCCCATTACCAAACCAGAAGACAGCTCCCTTCCCTCCCCTCCCCTTTAGGAAAAAGAGCCATTTTTATTTATTGATTCATCGAGGTTTCCGCTACAGCAAGTAAGCTGCTGGGGAGTGATAAGAGAATGGGAAGAATTCTTATTTCCCTTCTCTTGCTTTCTCGCTTTCTTCTGGGTAACGATGCCTTGGAGATGGAGCGGCGGCGCCGGACCGAGAGAATATCGGGAAGTGCTGGTGACGTGCTTGAAGACAACCCGGTTGGAAGACTTAAAGTTTTTATTTATGACCTGCCGAGAAAATACAACAAGAAGCTTGTCGAGAAGGATCCCCGATGCCTAAATCACATGTTCGCCGCTGAGATTTTCATGCATCGCTTCTTGATATCTAGTCCAGTTCGAACTCTTGATCCCGAAGAAGCAGATTGGTTCTATACACCTGTATATTCTACTTGTGACTTGACTCCAAATGGCCTTCCATTGCCCTTCAAATCCCCAAGAATGATGAGAAGTGCCATTCAGCTCATCTCCTCAAGATGGCCCTACTGGAATAGAACCGAAGGCGCCAATCACTTCTTCGTCGTGCCTCATGATTTTGGCGCGTGCTTCCATTATCAGGAAGCAAAGGCAATAGAACGAGGAATTCTTCTTTTGCTCCTGCGAGCTACTTTAGTTCAAACTTTTGGACAAATGAATCATGTGTGCTTGAAGGAGGGATCCATTACTATTCCCCCATACGCTCCACCAATGAAGATGCAAGCTCACCTTCTTCCCCCCGAAACTCCCCGTTCAATCTTTGTTTACTTTCGAGGCTTATTTTACGATGATAGTAATGATCCTCAAGGTGGATACTATGCAAGAGGCGCCAGGGCGTCGGTGTGGGAGAACTTTAAGAACAATCCTCTCTTCGACATATCATCACAGCATCCGATGACGTACTACGAGGACATGCAGAGATCAGTGTTCTGCTTGTGCCCTTTAGGGTGGGCTCCATGGAGCCCGAGATTGGTAGAGGCAGTGGTCTTTGGGTGCATCCCAGTGATTATAGCTGATGAAATAGTGCTCCCGTTCGCCGACGCGATACCGTGGGACAAAATAGGCGTCTTTGTGGCGGAGGATGATGTTCAGAAGCTGGATACTATCCTCACTTCAATACCATTTCAAGTCATATTGAGGAAGCAGAGGCTGCTTGCAAATCCTTCAATGAAACAAGCAATGCTGTTTCCTCAGCCAGCACAAGCAGGTGATGCCTTCCACCAGATATTAAATGGGCTTGCAAGGAAGCTGCCCCATGATGAGACTGTGTATGTGAGGGGTGGAAAGAAGGCCTTGAACTGGACTGGAGGCCCTGCAGAAGACCTTAAACCTTGGTAGTGCTGTTGATATCATCACTCATCAGTTTTAACTGTACAATCCTTGTTCTTTTTTTTAATCGTTATTTAAAAAAAAAATAGTTTAAAACCTTCGATCTCTACTTTTGTCATAGAAAGCATTTCTGCTGTTTGCAATTATTGTTTTTGTTGCTGGTTAAGATAAAGTGAGTCGAATGTAGAGCTTGATTTTATGTACAAATCTAGATAACTACAAGAAGTCTTCAAATTGTATTGTATTTTGTGTAGGCTAAATTTGCTTAAATAAGATTTAATTTTTGATGATTTGAAGATTAATAAATTAATAAAACTTTGTTTTGATTTGTTTCTATATTTTATGTGATTTTAATAACGCCTACTTGGCCATGAG

Network for GWHGAAEX001813

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03016.14	Exostosin	47	342	9.50E-74

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT47

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.700
SRP064423	SRR2545915	Juvenile tuber	0.780
SRP108465	SRR5643513	five period of Gastrodia elata	3.500
	SRR5643514	five period of Gastrodia elata	2.140
	SRR5643515	five period of Gastrodia elata	3.540
	SRR5643524	five period of Gastrodia elata	1.860
	SRR5643525	five period of Gastrodia elata	69.210
	SRR5643528	five period of Gastrodia elata	38.190
	SRR5643658	five period of Gastrodia elata	173.440
	SRR5643659	five period of Gastrodia elata	0.900
	SRR5643660	five period of Gastrodia elata	0.680
	SRR5643661	five period of Gastrodia elata	0.570
	SRR5643662	five period of Gastrodia elata	2.030
	SRR5643663	five period of Gastrodia elata	1.730
	SRR5643664	five period of Gastrodia elata	0.700
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.190
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.400
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.810
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.790
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.370
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.950
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.310
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.130
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	2.140
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.140
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	2.800
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	2.800
SRP279888	Gastro	Gastrodia elata tuber	1.16
	Juven	Juvenile tuber	1.04
	Mother_Gastro	Mother tuber of Gastrodia elata	2.26
	Mother_Juven	Mother tuber of Juvenile	0.81