Detail information of GWHGAAEX001821/evm.TU.scaffold_112.88


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|226309959|ref|YP_002769853.1|3.00E-110hypothetical protein BBR47_03720 [Brevibacillus brevis NBRC 100599]
KOGKOG30092.00E-143Predicted carbohydrate kinase, contains PfkB domain
nrgi|720079728|ref|XP_010241761.1|5.35E-174PREDICTED: pseudouridine-metabolizing bifunctional protein C1861.05 isoform X1 [Nelumbo nucifera]
trEMBLtr|A0A061GTS7|A0A061GTS7_THECC4.00E-165Indigoidine synthase A family protein isoform 1 {ECO:0000313|EMBL:EOY32808.1}
TAIRAT1G505102.00E-143indigoidine synthase A family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011319333222007233-
Transcript Sequence

Network for GWHGAAEX001821

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04227.11Indigoidine_A253142.30E-129
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K16329psuG Metabolic pathways map01100
Pyrimidine metabolismmap00240

Gene Ontology

GO term OntologyName
GO:0016798Molecular Functionhydrolase activity, acting on glycosyl bonds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms89.390
SRR2545915Juvenile tuber61.670
SRP108465SRR5643513five period of Gastrodia elata12.380
SRR5643514five period of Gastrodia elata12.720
SRR5643515five period of Gastrodia elata12.310
SRR5643524five period of Gastrodia elata12.120
SRR5643525five period of Gastrodia elata16.940
SRR5643528five period of Gastrodia elata15.200
SRR5643658five period of Gastrodia elata16.370
SRR5643659five period of Gastrodia elata6.420
SRR5643660five period of Gastrodia elata8.060
SRR5643661five period of Gastrodia elata8.060
SRR5643662five period of Gastrodia elata5.970
SRR5643663five period of Gastrodia elata6.840
SRR5643664five period of Gastrodia elata7.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.780
SRR6049655Rhizomagastrodiae_C368-T10_good_114.710
SRR6049656Rhizomagastrodiae_C368-T07_good_118.420
SRR6049657Rhizomagastrodiae_C368-T07_good_117.770
SRR6049658Rhizomagastrodiae_C368-T04_good_110.840
SRR6049659Rhizomagastrodiae_C368-T04_good_111.500
SRR6049660Rhizomagastrodiae_C368-T01_good_114.580
SRR6049661Rhizomagastrodiae_C368-T04_good_112.790
SRR6049662Rhizomagastrodiae_C368-T01_good_110.690
SRR6049663Rhizomagastrodiae_C368-T01_good_19.700
SRR6049664Rhizomagastrodiae_C368-T10_good_116.560
SRR6049665Rhizomagastrodiae_C368-T10_good_116.560
SRP279888GastroGastrodia elata tuber 6.02
JuvenJuvenile tuber9.53
Mother_GastroMother tuber of Gastrodia elata 2.19
Mother_JuvenMother tuber of Juvenile 4.72