Detail information of GWHGAAEX001826/evm.TU.scaffold_112.92


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG22403.00E-79RNA polymerase II general transcription factor BTF3 and related proteins
nrgi|567897808|ref|XP_006441392.1|3.27E-86hypothetical protein CICLE_v10022594mg [Citrus clementina]
trEMBLtr|A0A067EXA0|A0A067EXA0_CITSI1.00E-86Uncharacterized protein {ECO:0000313|EMBL:KDO59688.1}
TAIRAT1G178803.00E-79basic transcription factor 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011321086382115983+
Transcript Sequence

Network for GWHGAAEX001826

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01849.17NAC911461.30E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01527EGD1, BTF3 Apoptosis - fly map04214

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms83.140
SRR2545915Juvenile tuber130.460
SRP108465SRR5643513five period of Gastrodia elata187.380
SRR5643514five period of Gastrodia elata234.410
SRR5643515five period of Gastrodia elata203.800
SRR5643524five period of Gastrodia elata215.820
SRR5643525five period of Gastrodia elata148.280
SRR5643528five period of Gastrodia elata135.410
SRR5643658five period of Gastrodia elata128.740
SRR5643659five period of Gastrodia elata217.870
SRR5643660five period of Gastrodia elata219.950
SRR5643661five period of Gastrodia elata222.360
SRR5643662five period of Gastrodia elata202.340
SRR5643663five period of Gastrodia elata213.880
SRR5643664five period of Gastrodia elata186.100
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1181.030
SRR6049655Rhizomagastrodiae_C368-T10_good_1477.220
SRR6049656Rhizomagastrodiae_C368-T07_good_1223.700
SRR6049657Rhizomagastrodiae_C368-T07_good_1153.420
SRR6049658Rhizomagastrodiae_C368-T04_good_1123.010
SRR6049659Rhizomagastrodiae_C368-T04_good_1105.020
SRR6049660Rhizomagastrodiae_C368-T01_good_1159.100
SRR6049661Rhizomagastrodiae_C368-T04_good_1127.830
SRR6049662Rhizomagastrodiae_C368-T01_good_1222.370
SRR6049663Rhizomagastrodiae_C368-T01_good_1198.250
SRR6049664Rhizomagastrodiae_C368-T10_good_1328.670
SRR6049665Rhizomagastrodiae_C368-T10_good_1328.670
SRP279888GastroGastrodia elata tuber 286.25
JuvenJuvenile tuber335.05
Mother_GastroMother tuber of Gastrodia elata 63.52
Mother_JuvenMother tuber of Juvenile 104.73