Detail information of GWHGAAEX001832/evm.TU.scaffold_112.99


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|256824425|ref|YP_003148385.1|8.00E-45cell wall-binding protein [Kytococcus sedentarius DSM 20547]
nrgi|731421073|ref|XP_010661610.1|1.49E-110PREDICTED: xylem serine proteinase 1 [Vitis vinifera]
Swissprottr|Q39547|CUCM1_CUCME8.00E-103Cucumisin (Precursor)
trEMBLtr|B9RDI2|B9RDI2_RICCO7.00E-111Xylem serine proteinase 1, putative {ECO:0000313|EMBL:EEF50440.1}
TAIRAT4G002306.00E-99xylem serine peptidase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011322462062247874+
Transcript Sequence

Network for GWHGAAEX001832

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module13

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05922.15Inhibitor_I91340.00024
PF00082.21Peptidase_S8562374.00E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0004252Molecular Functionserine-type endopeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.480
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata1.520
SRR5643514five period of Gastrodia elata1.070
SRR5643515five period of Gastrodia elata0.190
SRR5643524five period of Gastrodia elata0.500
SRR5643525five period of Gastrodia elata1.110
SRR5643528five period of Gastrodia elata1.030
SRR5643658five period of Gastrodia elata0.620
SRR5643659five period of Gastrodia elata1.320
SRR5643660five period of Gastrodia elata1.270
SRR5643661five period of Gastrodia elata1.840
SRR5643662five period of Gastrodia elata2.810
SRR5643663five period of Gastrodia elata2.770
SRR5643664five period of Gastrodia elata7.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.280
SRR6049655Rhizomagastrodiae_C368-T10_good_13.990
SRR6049656Rhizomagastrodiae_C368-T07_good_11.370
SRR6049657Rhizomagastrodiae_C368-T07_good_11.180
SRR6049658Rhizomagastrodiae_C368-T04_good_11.850
SRR6049659Rhizomagastrodiae_C368-T04_good_10.830
SRR6049660Rhizomagastrodiae_C368-T01_good_12.310
SRR6049661Rhizomagastrodiae_C368-T04_good_10.850
SRR6049662Rhizomagastrodiae_C368-T01_good_11.280
SRR6049663Rhizomagastrodiae_C368-T01_good_13.220
SRR6049664Rhizomagastrodiae_C368-T10_good_11.320
SRR6049665Rhizomagastrodiae_C368-T10_good_11.320
SRP279888GastroGastrodia elata tuber 2.25
JuvenJuvenile tuber1.60
Mother_GastroMother tuber of Gastrodia elata 1.56
Mother_JuvenMother tuber of Juvenile 0.79