Detail information of GWHGAAEX001833/evm.TU.scaffold_112.100


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|71282552|ref|YP_270567.1|8.00E-32serine protease [Colwellia psychrerythraea 34H]
nrgi|659109517|ref|XP_008454753.1|8.85E-91PREDICTED: xylem serine proteinase 1-like [Cucumis melo]
Swissprottr|Q9LLL8|XSP1_ARATH2.00E-85Xylem serine proteinase 1 (Precursor)
trEMBLtr|A0A068UKA7|A0A068UKA7_COFCA5.00E-88Coffea canephora
TAIRAT4G002305.00E-84xylem serine peptidase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011322479492249229+
Transcript Sequence

Network for GWHGAAEX001833

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module13

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00082.21Peptidase_S8982162.30E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0004252Molecular Functionserine-type endopeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.730
SRR2545915Juvenile tuber0.490
SRP108465SRR5643513five period of Gastrodia elata1.310
SRR5643514five period of Gastrodia elata1.030
SRR5643515five period of Gastrodia elata2.290
SRR5643524five period of Gastrodia elata1.270
SRR5643525five period of Gastrodia elata1.660
SRR5643528five period of Gastrodia elata1.090
SRR5643658five period of Gastrodia elata1.460
SRR5643659five period of Gastrodia elata3.570
SRR5643660five period of Gastrodia elata3.210
SRR5643661five period of Gastrodia elata3.970
SRR5643662five period of Gastrodia elata6.640
SRR5643663five period of Gastrodia elata4.660
SRR5643664five period of Gastrodia elata19.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.490
SRR6049655Rhizomagastrodiae_C368-T10_good_12.950
SRR6049656Rhizomagastrodiae_C368-T07_good_12.020
SRR6049657Rhizomagastrodiae_C368-T07_good_11.330
SRR6049658Rhizomagastrodiae_C368-T04_good_11.700
SRR6049659Rhizomagastrodiae_C368-T04_good_10.460
SRR6049660Rhizomagastrodiae_C368-T01_good_11.480
SRR6049661Rhizomagastrodiae_C368-T04_good_11.330
SRR6049662Rhizomagastrodiae_C368-T01_good_11.740
SRR6049663Rhizomagastrodiae_C368-T01_good_12.590
SRR6049664Rhizomagastrodiae_C368-T10_good_11.930
SRR6049665Rhizomagastrodiae_C368-T10_good_11.930
SRP279888GastroGastrodia elata tuber 2.43
JuvenJuvenile tuber2.01
Mother_GastroMother tuber of Gastrodia elata 2.33
Mother_JuvenMother tuber of Juvenile 1.28