Detail information of GWHGAAEX001847/evm.TU.scaffold_112.116


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743788224|ref|XP_010922611.1|0PREDICTED: uncharacterized protein LOC105045882 [Elaeis guineensis]
Swissprottr|Q7Y1W1|TIC56_ARATH0Protein TIC 56, chloroplastic {ECO:0000303|PubMed:23372012} (Precursor)
trEMBLtr|A0A067JG01|A0A067JG01_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP22841.1}
TAIRAT5G015900Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011324704962502267-
Transcript Sequence

Network for GWHGAAEX001847

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14237.5DUF43392382806.90E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.560
SRR2545915Juvenile tuber22.440
SRP108465SRR5643513five period of Gastrodia elata59.660
SRR5643514five period of Gastrodia elata64.620
SRR5643515five period of Gastrodia elata57.630
SRR5643524five period of Gastrodia elata56.190
SRR5643525five period of Gastrodia elata18.300
SRR5643528five period of Gastrodia elata8.180
SRR5643658five period of Gastrodia elata8.930
SRR5643659five period of Gastrodia elata44.000
SRR5643660five period of Gastrodia elata44.560
SRR5643661five period of Gastrodia elata79.970
SRR5643662five period of Gastrodia elata37.650
SRR5643663five period of Gastrodia elata43.440
SRR5643664five period of Gastrodia elata42.590
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_133.230
SRR6049655Rhizomagastrodiae_C368-T10_good_136.480
SRR6049656Rhizomagastrodiae_C368-T07_good_132.150
SRR6049657Rhizomagastrodiae_C368-T07_good_137.600
SRR6049658Rhizomagastrodiae_C368-T04_good_124.610
SRR6049659Rhizomagastrodiae_C368-T04_good_120.010
SRR6049660Rhizomagastrodiae_C368-T01_good_131.480
SRR6049661Rhizomagastrodiae_C368-T04_good_129.300
SRR6049662Rhizomagastrodiae_C368-T01_good_140.170
SRR6049663Rhizomagastrodiae_C368-T01_good_133.010
SRR6049664Rhizomagastrodiae_C368-T10_good_134.580
SRR6049665Rhizomagastrodiae_C368-T10_good_134.580
SRP279888GastroGastrodia elata tuber 39.76
JuvenJuvenile tuber29.23
Mother_GastroMother tuber of Gastrodia elata 6.49
Mother_JuvenMother tuber of Juvenile 11.04